Gene Coch_0939 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCoch_0939 
Symbol 
ID8367358 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCapnocytophaga ochracea DSM 7271 
KingdomBacteria 
Replicon accessionNC_013162 
Strand
Start bp1092998 
End bp1093699 
Gene Length702 bp 
Protein Length233 aa 
Translation table11 
GC content39% 
IMG OID644983364 
Producthypothetical protein 
Protein accessionYP_003141055 
Protein GI256819776 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000126087 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTACAGAA TTATTACCAC TATTGCAGTG GCGTTTGCTA CTATTACAGC GGTTAACGCC 
CAAGAGTTTA AAGTAGGAGC TAAAGCAGGA TTGCTTCTTT CTGACCTTTC TATTGCTAAT
ACTTCTATTC AATGGAGTGA CGGAGGTACC TCATACTTAA CAACTGGAGA TATAAACACC
ACTCTCAAGG CGGGCTTTCA CTTCGGAGGC TTTATAGAAT ACGGTTTTAA CGACCGCTTG
TTTGTAGAGG GAGGAATAGA TTATGCTTTT CAAGGAGCTA AAGTGAAGTC GGGGGAAACT
ATGACGGTTA ACCTTTCTAC ATATGATGTT AGCAACGAAA AGGAAAACCC AAATGGGACT
TCTATCAGAA CGCAACAGCT TAACATTCCT CTTTGGGTGA AGTATGATAT TGCTGGTTTC
CGTCCTAAAG TAGGGGTGAA CTTAGGTTTC TTGACAAAGG CAGAGCTCAA AGGAAAAAAT
GAAGATGGCA ATTCAGAAAC TTTATCGTTA AATCCTAATA AAACATTCGA CTTTGGACTC
GGCGTGGGAG CTGAATACAA TTTGCCTTTT GGTTTGTTCT TTGACGCTAC TTTCAACTTA
GGACTTACTG ATGTTTCTAC TAAAGAAAAA ACAACTGAAC AATTTCCTGC ATTGGAAATG
AGAAACCGTG TAATACAAAT AGGAGTAGGG TATAAGTTTT AA
 
Protein sequence
MYRIITTIAV AFATITAVNA QEFKVGAKAG LLLSDLSIAN TSIQWSDGGT SYLTTGDINT 
TLKAGFHFGG FIEYGFNDRL FVEGGIDYAF QGAKVKSGET MTVNLSTYDV SNEKENPNGT
SIRTQQLNIP LWVKYDIAGF RPKVGVNLGF LTKAELKGKN EDGNSETLSL NPNKTFDFGL
GVGAEYNLPF GLFFDATFNL GLTDVSTKEK TTEQFPALEM RNRVIQIGVG YKF