Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Coch_0939 |
Symbol | |
ID | 8367358 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Capnocytophaga ochracea DSM 7271 |
Kingdom | Bacteria |
Replicon accession | NC_013162 |
Strand | - |
Start bp | 1092998 |
End bp | 1093699 |
Gene Length | 702 bp |
Protein Length | 233 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 644983364 |
Product | hypothetical protein |
Protein accession | YP_003141055 |
Protein GI | 256819776 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.0000126087 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTACAGAA TTATTACCAC TATTGCAGTG GCGTTTGCTA CTATTACAGC GGTTAACGCC CAAGAGTTTA AAGTAGGAGC TAAAGCAGGA TTGCTTCTTT CTGACCTTTC TATTGCTAAT ACTTCTATTC AATGGAGTGA CGGAGGTACC TCATACTTAA CAACTGGAGA TATAAACACC ACTCTCAAGG CGGGCTTTCA CTTCGGAGGC TTTATAGAAT ACGGTTTTAA CGACCGCTTG TTTGTAGAGG GAGGAATAGA TTATGCTTTT CAAGGAGCTA AAGTGAAGTC GGGGGAAACT ATGACGGTTA ACCTTTCTAC ATATGATGTT AGCAACGAAA AGGAAAACCC AAATGGGACT TCTATCAGAA CGCAACAGCT TAACATTCCT CTTTGGGTGA AGTATGATAT TGCTGGTTTC CGTCCTAAAG TAGGGGTGAA CTTAGGTTTC TTGACAAAGG CAGAGCTCAA AGGAAAAAAT GAAGATGGCA ATTCAGAAAC TTTATCGTTA AATCCTAATA AAACATTCGA CTTTGGACTC GGCGTGGGAG CTGAATACAA TTTGCCTTTT GGTTTGTTCT TTGACGCTAC TTTCAACTTA GGACTTACTG ATGTTTCTAC TAAAGAAAAA ACAACTGAAC AATTTCCTGC ATTGGAAATG AGAAACCGTG TAATACAAAT AGGAGTAGGG TATAAGTTTT AA
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Protein sequence | MYRIITTIAV AFATITAVNA QEFKVGAKAG LLLSDLSIAN TSIQWSDGGT SYLTTGDINT TLKAGFHFGG FIEYGFNDRL FVEGGIDYAF QGAKVKSGET MTVNLSTYDV SNEKENPNGT SIRTQQLNIP LWVKYDIAGF RPKVGVNLGF LTKAELKGKN EDGNSETLSL NPNKTFDFGL GVGAEYNLPF GLFFDATFNL GLTDVSTKEK TTEQFPALEM RNRVIQIGVG YKF
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