Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Coch_0879 |
Symbol | |
ID | 8367298 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Capnocytophaga ochracea DSM 7271 |
Kingdom | Bacteria |
Replicon accession | NC_013162 |
Strand | + |
Start bp | 1035171 |
End bp | 1035944 |
Gene Length | 774 bp |
Protein Length | 257 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 644983304 |
Product | phage antirepressor protein |
Protein accession | YP_003140995 |
Protein GI | 256819716 |
COG category | [S] Function unknown |
COG ID | [COG3645] Uncharacterized phage-encoded protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.00137369 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTATGAAA TAACAAACAC AAACTATCAG CCTATGCAAG AGTTGATTAA AATCACCGAA AAAAATGGCA ATAAAGCAGT ATCAGCAAGA GAATTACACA AATTCTTAGA AATTACTGAA AGATTTAGTA ATTGGTTTGA AAGAATGTTG CAGTATGGGT TTGTTGAAAA CCACGATTTT ACAAGTGTTA AAAGTTTTAC GCTTGTGAAT AATGGTGCGC AAAGAGAGTT AGAAGACTAC GCCCTCACTC TTGATTGTGC AAAAGAGATT TCAATGCTAC AACGCTCTGA AAGGGGCAAA ATGGCACGCC AATATTTTAT TGAGTGTGAA AAGCAACTAA GAGCAAAAGA ACAAGCACAC CAACAAATTC CTCAATCATT TTCAGAAGCA TTGCGATTAG CAGCTGAACA AGCCGAGAGG ATAGAAGCCC AACAAAAGCA ACTGCAAGCG CAAGCGCCTA AGGTATTATT TGCAGACACA GTAATAGGCT CTCAATCTTC CTGCCTTATT GGTGAACTTG CTAAACTCAT CACTCAAAAA GGCTATGAGA TAGGAGAAAA GAGGCTTTTC AAGTGGTTAC GAGAAAATCA CTACTTAGGC ACACGAGGCG AGTACTATAA CATTCCTAAC CAACAATACA TTGAGCAAGG ACTTTTTGAA TTAAAGAAAG GCACACGCTC AGGAAGCGGC GGGGTAATGC ACACTACTAT TACTCCAAAA GTAACAGGCA AAGGGCAAGT TTATTTTGTT AATAAGTTCC TTAAAACAAT ATAA
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Protein sequence | MYEITNTNYQ PMQELIKITE KNGNKAVSAR ELHKFLEITE RFSNWFERML QYGFVENHDF TSVKSFTLVN NGAQRELEDY ALTLDCAKEI SMLQRSERGK MARQYFIECE KQLRAKEQAH QQIPQSFSEA LRLAAEQAER IEAQQKQLQA QAPKVLFADT VIGSQSSCLI GELAKLITQK GYEIGEKRLF KWLRENHYLG TRGEYYNIPN QQYIEQGLFE LKKGTRSGSG GVMHTTITPK VTGKGQVYFV NKFLKTI
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