Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Coch_0868 |
Symbol | |
ID | 8367287 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Capnocytophaga ochracea DSM 7271 |
Kingdom | Bacteria |
Replicon accession | NC_013162 |
Strand | - |
Start bp | 1029017 |
End bp | 1029751 |
Gene Length | 735 bp |
Protein Length | 244 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 644983293 |
Product | putative phage repressor |
Protein accession | YP_003140984 |
Protein GI | 256819705 |
COG category | [K] Transcription |
COG ID | [COG2932] Predicted transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.0000901562 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGGATA ATTCAGATAC ACAACAAAAG TTAAGTGAAA TTCCTGAAAT TAATCAACGC TTCATTGAAG TAATGAAGTA TAAAGGATAT TCAGGATACA AACTTGCACA AGAAATTGAC GGTCTTTCAG AAGCAAAAAT AACACATATA CGTTCGGGGA GAAATAAAGT GAGCTCTGAA ATATTAAAAC TTATAACTAA TAAGTTCCCC GATATTAATC CCATTTGGTT GCTCACAGGA AAAGAAACTA TGATAAAGGG TGAAAACACC CCTGAAAAAA CAATAACATC ATCAGTGCCA ATAATCGCCA ATGAAGTAAT CAATTACAGT GAAAAAGGCG TGCCTTATTA CAATGTCGAT TTTACCAACG GTTTTATGGG TGTGGTAGAG TTTGAAAACA TCAAACCCGA TTATTACATT AACTACCCTC CTGCTAATAA TTGCGATTTT TGGATTAACG CCACCGGTCG CTCAATGGAA AATATGATAA ATCACGGTGA TATAGTAGCC GTCAAAGAAG TAGATTTATC TTGGTTTCCT CTCGGCGAAA TATACGCTAT CGTAACATCT AATGGCTATC GCCTCATCAA GCGCATTACT GAGTCTCGAA ACAAGAAATG TTTTCGTCTT GTGTCTGAAA ATCCCGATAA AGACAACTAT CCCGACCAAG ATATACCAAA ACAATATATC ACTCGTCTGT TCAAGGTGAT AATTGCAAGT AAAATAATTA GTTAG
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Protein sequence | MKDNSDTQQK LSEIPEINQR FIEVMKYKGY SGYKLAQEID GLSEAKITHI RSGRNKVSSE ILKLITNKFP DINPIWLLTG KETMIKGENT PEKTITSSVP IIANEVINYS EKGVPYYNVD FTNGFMGVVE FENIKPDYYI NYPPANNCDF WINATGRSME NMINHGDIVA VKEVDLSWFP LGEIYAIVTS NGYRLIKRIT ESRNKKCFRL VSENPDKDNY PDQDIPKQYI TRLFKVIIAS KIIS
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