Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Coch_0738 |
Symbol | |
ID | 8367155 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Capnocytophaga ochracea DSM 7271 |
Kingdom | Bacteria |
Replicon accession | NC_013162 |
Strand | + |
Start bp | 890556 |
End bp | 891470 |
Gene Length | 915 bp |
Protein Length | 304 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 644983164 |
Product | ribonuclease Z |
Protein accession | YP_003140856 |
Protein GI | 256819577 |
COG category | [R] General function prediction only |
COG ID | [COG1234] Metal-dependent hydrolases of the beta-lactamase superfamily III |
TIGRFAM ID | [TIGR02651] ribonuclease Z |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAGTAA CTATCTTAGG TTGTCACAGT GCGACCCCTC GCTCCAATGC CCGTCCTTCG GCTCAACTGC TCGAAATGCG CGGTCATCTG TTCCTCATCG ATTGTGGAGA GGCTACCCAA ATCGCCCTCC GCAATGCCAA TGCTAAGTTC TCCCGCATCA AGCACATCTT CATCTCTCAC CTCCACGGCG ACCATTTCTA CGGACTCTTC GGACTCATCT CTACTTTCCA ACTCCTCGGT CGCGAAGCCG AAATGCACAT CTACGGTCCT AAGGGCATCA AAGAAGCCGT TTTGCTCATT CTCAAACTCG GCGGCGCTTA TACCCCTTTC CCCTTGCATT TTCACGAGCT ATCTTCCAAA ACTTCCGAAC TCTTATACGA AGACGACAAA GTACTCGTGC GTACCATTCC GTTGCAACAC CGCGTCTATA CCAATGGTTT TCTCTTTCAA GAAAAAGAAG GCGAACGTCG CCTAAATATC GACGCAATTG CTGAGTATCC CGAGATACAA ACGTGCGACT ATCAGAACAT CAAAAACGGC AAAGATATAA CATTAGAAAA CGGCAAAACT ATTGCCAATA CCGAGCTCAC CTTCGACCCT CACCGCCCGC AAAGCTATGC CTATTGTAGC GATACTCTTT ATTTCGAAGC TTTGGCTACC GAAATACAAG GCGCAAGAGT TGTGTATCAC GAATCTACCT TTTTAGAGAT AAACGAAGAA CTTGCTGTTA AAACAATGCA CTCCACCGCC TACCAAGCAG GACTCACAGC TAAGAATGCC CACGCCGATG CTCTCATTTT AGGGCACTAC TCCTCTCGAT ATCCCGATGT CAATCTCTTC AAGCAGGAAG CACAAGAAGT CTTTAAGAAC GTCTTTTTAG CCGAAGATGG CAAAAAGTTC ATTTTCGATA ATTGA
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Protein sequence | MEVTILGCHS ATPRSNARPS AQLLEMRGHL FLIDCGEATQ IALRNANAKF SRIKHIFISH LHGDHFYGLF GLISTFQLLG REAEMHIYGP KGIKEAVLLI LKLGGAYTPF PLHFHELSSK TSELLYEDDK VLVRTIPLQH RVYTNGFLFQ EKEGERRLNI DAIAEYPEIQ TCDYQNIKNG KDITLENGKT IANTELTFDP HRPQSYAYCS DTLYFEALAT EIQGARVVYH ESTFLEINEE LAVKTMHSTA YQAGLTAKNA HADALILGHY SSRYPDVNLF KQEAQEVFKN VFLAEDGKKF IFDN
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