Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Coch_0714 |
Symbol | |
ID | 8367131 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Capnocytophaga ochracea DSM 7271 |
Kingdom | Bacteria |
Replicon accession | NC_013162 |
Strand | - |
Start bp | 870801 |
End bp | 871928 |
Gene Length | 1128 bp |
Protein Length | 375 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 644983141 |
Product | DegT/DnrJ/EryC1/StrS aminotransferase |
Protein accession | YP_003140833 |
Protein GI | 256819554 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0399] Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAAGAAA AAATATGGCT TTCTTCCCCT CATATGGGAG GGAACGAACT TAAATATATC CATCAAGCCT TTGAGGAGAA TTGGGTAGCG CCCTTAGGTC CTAACGTAAA CGGCTTTGAG GAAGATTTAC AGCGCTTTTT AGGCAATGGA GTGAAAGTAT CGGCGCTTTC GGCGGGTACG GCAGCCTTGC ACCTAGCTCT TATAGAATGT GATGTGCAAG CAGGCGATGA GGTGCTCTGT CAATCGATGA CTTTTTCAGC TTCTGCTAAC CCTATCGTAT ACCAAGGAGC TACGCCCGTG TTTGTAGACT CGGAAGAGAG CACCTGGAAT ATCTCTCCCG TTTTCTTAGA AGAAGCTATT AAAGACCGCA TTAAGAAAGG CAAGAAGCCT AAAGCGGTAA TCGCTGTATC GCTCTACGGA ATGCCTTTCA AAATAGAGGA GGTGCTCACT CTATGTAAAA AGTATGATAT TCCATTGGTG GAAGATGCCG CCGAAGCCTT AGGAAGCACT TACAAAGGAA AACCTTGTGG TACTTTTGGT AGGTTTGGGG TACTGTCGTT CAACGGCAAT AAGATTATCA CTACCTCAGG AGGAGGGGCT TTGGTATGTC ACACTCAAGA AGAGAAAGAT AAAGCTGTAT TTTTGAGCAC CCAAGCGCGC GACAACGCTC CTCACTACCA GCATTCGCAC ATAGGGTATA ACTACCGTAT GAGCAATATT ACGGCAGGCA TAGGTCGCGG ACAAATGGAG GTATTGCCAC AGCGCATTGA AGCTCGCCGA AAGATGCACG CTTTTTATGC CGATTTGTTC GAAGGAATTG AAGGGATAAA ATTACTTACA GAGCCCAATG AAGATTACTT TTGTAATTAT TGGCTTTCGG CTATTACCAT TGATAAAACT AAAACAGGAT TTGATAGAGA AGACTTGCGA TTAGCCTTTT TGGAAGAAAA TATTGAAACG CGCCCCTTGT GGAAACCTAT GCACTTGCAA CCTGTGTTTG CCTCAGCTCC TTACTATGGT AAAAAGACCT GTGAGCACTT ATTTAACAAT GGTTTATGTT TGCCCTCAGG TTCTAATCTT ACTGATGCAG ACCGAGAGAG AATAAAAGGC GTTTTTAAGA AATTATAA
|
Protein sequence | MKEKIWLSSP HMGGNELKYI HQAFEENWVA PLGPNVNGFE EDLQRFLGNG VKVSALSAGT AALHLALIEC DVQAGDEVLC QSMTFSASAN PIVYQGATPV FVDSEESTWN ISPVFLEEAI KDRIKKGKKP KAVIAVSLYG MPFKIEEVLT LCKKYDIPLV EDAAEALGST YKGKPCGTFG RFGVLSFNGN KIITTSGGGA LVCHTQEEKD KAVFLSTQAR DNAPHYQHSH IGYNYRMSNI TAGIGRGQME VLPQRIEARR KMHAFYADLF EGIEGIKLLT EPNEDYFCNY WLSAITIDKT KTGFDREDLR LAFLEENIET RPLWKPMHLQ PVFASAPYYG KKTCEHLFNN GLCLPSGSNL TDADRERIKG VFKKL
|
| |