Gene Coch_0699 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCoch_0699 
Symbol 
ID8367116 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCapnocytophaga ochracea DSM 7271 
KingdomBacteria 
Replicon accessionNC_013162 
Strand- 
Start bp856029 
End bp857147 
Gene Length1119 bp 
Protein Length372 aa 
Translation table11 
GC content37% 
IMG OID644983126 
ProductUDP-N-acetylglucosamine 2-epimerase 
Protein accessionYP_003140818 
Protein GI256819539 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0381] UDP-N-acetylglucosamine 2-epimerase 
TIGRFAM ID[TIGR00236] UDP-N-acetylglucosamine 2-epimerase 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.296788 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAATAA CAAAACTTCT TTTCATATTT GGCACACGTC CCGAGGCTAT TAAAATGGCT 
CCGCTTATAA AAGCTTTTCA AAAAGAAAAA ACTTTTGAAA CAAAAGTATG TGTAACAGCA 
CAACATCGTG AGATGCTTGA CCAAGTGTTA GATTTTTTTG AGATAAAAAC AGATTACGAC 
CTTAATGTGA TGAAGCCTAA TCAGAATTTG TATACACTTA CCGCAACCAT CATTACAGAA 
CTAAAAACTG TTTTAGAAGA TTGTAACCCT GACTATATAT TTGTGCATGG CGATACTACT 
ACTACTATGG CTGCAAGCAT TGCTGGGTTT TATGCAGGAG CAAAAGTGTG CCATATAGAA 
GCAGGACTTA GAACTTTTAA TAAATACGCT CCTTTCCCCG AGGAGATAAA CCGCAAAGTA 
ACAGGAGCTA TAGCAGATTT TCATTTTGCT CCTACCCAAC AAGCAAAACA AAATTTATTA 
AGAGAAGCAG TAGATGAGAA AAACATTTTA GTAACAGGAA ATACAGTAAT AGATGCTCTT 
TTAGAAAGTT CTAAAAGAGT GGTAAATTTA CAAGACGAAG AGATTGATGC TTTAAAAAAG 
ATTGTAGATC GCACTAAAAA ACTAATCTTA GTTACAGGAC ACCGACGTGA AAACCAAGGC 
GAAGGCTTTA TACATATCTG TCAGGCACTG AAAAAAATCG CTTTACAAAA TCCTGAGGTA 
CAGATAGTCT ATCCAGTACA CTTAAATCCT AATGTAAAAG AACCTGTTTA TCGTATATTA 
TCAGGCATTG AAAATGTAAA GCTCATAGCA CCCTTAGCCT ATCCTGCTTT TGTTTGGCTG 
ATGAACCAAT CCTACCTTAT CATTACCGAT AGTGGTGGCG TACAAGAGGA AGCCCCTAGC 
TTAGGCAAAC CTGTATTGGT AATGCGTGAC ACGACTGAGC GCCCTGAAGC TGTAAGTGCA 
GGGACTGTTA TCTTAGTAGG TACTAATGAG CAAAAAATAG TAGATGAATG TGAACAACTA 
CTTAATAACC AAGAGAAATA CTCAAAAATG AGTGCTTTAC ACAACCCCTA TGGCGATGGT 
AAGGCTTGCG AACGAATTGT AGAATTTTTT AAGAAATAA
 
Protein sequence
MAITKLLFIF GTRPEAIKMA PLIKAFQKEK TFETKVCVTA QHREMLDQVL DFFEIKTDYD 
LNVMKPNQNL YTLTATIITE LKTVLEDCNP DYIFVHGDTT TTMAASIAGF YAGAKVCHIE 
AGLRTFNKYA PFPEEINRKV TGAIADFHFA PTQQAKQNLL REAVDEKNIL VTGNTVIDAL 
LESSKRVVNL QDEEIDALKK IVDRTKKLIL VTGHRRENQG EGFIHICQAL KKIALQNPEV 
QIVYPVHLNP NVKEPVYRIL SGIENVKLIA PLAYPAFVWL MNQSYLIITD SGGVQEEAPS 
LGKPVLVMRD TTERPEAVSA GTVILVGTNE QKIVDECEQL LNNQEKYSKM SALHNPYGDG 
KACERIVEFF KK