Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Coch_0655 |
Symbol | |
ID | 8367072 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Capnocytophaga ochracea DSM 7271 |
Kingdom | Bacteria |
Replicon accession | NC_013162 |
Strand | + |
Start bp | 806657 |
End bp | 807490 |
Gene Length | 834 bp |
Protein Length | 277 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 644983082 |
Product | putative phage repressor |
Protein accession | YP_003140774 |
Protein GI | 256819495 |
COG category | [K] Transcription |
COG ID | [COG2932] Predicted transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.119193 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCAAATA TTGTTAGTAG AGTAAAAGAT TATATCGATT TCAAGGGATT ATCGGTTAGA AAGTTTGAAG AGCTTGTGGG CTTTTCCAAC GGTGCTTTTG CGACTCAGTA TAAAAATAAC AAGTCTATTG GAAGCGATAA AATAGAAAAT ATTCTACAAT CTTTTCCCGA ACTAAATGCT GAATGGTTGC TCACAGGTAA AGGTCCTATG TTAAAAAATA AGGAGATTGT CGAAACTCCC CGTGTAGAAA TTATCAAACC TTTAAAAGTA GAAGGAAGAG ATTTAACTCC CAAGGTGGTA GTGGTTGAAG AAGACGAACT TTTTAACCCC ATACCCTTAG TGCCTATATA CGCTCAAGCG GGCTATCTCA ATGGTTATGA AGACCCCGAA TACATAAAAG AACTCCCTAT GTACAACCTT CCCGAAATGC GAAACGGCAC TTTCAGAATG TTTCAAGTAA ACGGACTCTC TATGTTCCCC ACTCTGCAAG ACGGCAGTTA TGTGGTAGGG CAATTCGTCG AAAATTGGGA GTGGCTATCA GATAACAGGG TGTGCGTAGT AGTTACAGAG CGCGACGGAG TGATTGTAAA ACGGGTTTTA AACAAAATAA GAAAATATGG TAGTCTGTAT TGCAAATCCG ATAATCGCGA CTACCCGCAT ATTACCGTTA GAGCTGAAGA TATTAAAGAA GTATGGGAAT GTAAAATGCA CCTCTCTTTC GAGTTCCTCG ACCCTATCCC TGAGTACCAA AAAATTGCCG ATTTAGAAGC CAACGTTCAG TTCCTAACCG AACGTGTAGA ACAATTAGAA CATCACAACA AACCCATTTT ATAG
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Protein sequence | MSNIVSRVKD YIDFKGLSVR KFEELVGFSN GAFATQYKNN KSIGSDKIEN ILQSFPELNA EWLLTGKGPM LKNKEIVETP RVEIIKPLKV EGRDLTPKVV VVEEDELFNP IPLVPIYAQA GYLNGYEDPE YIKELPMYNL PEMRNGTFRM FQVNGLSMFP TLQDGSYVVG QFVENWEWLS DNRVCVVVTE RDGVIVKRVL NKIRKYGSLY CKSDNRDYPH ITVRAEDIKE VWECKMHLSF EFLDPIPEYQ KIADLEANVQ FLTERVEQLE HHNKPIL
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