Gene Coch_0592 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCoch_0592 
SymbolileS 
ID8367009 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCapnocytophaga ochracea DSM 7271 
KingdomBacteria 
Replicon accessionNC_013162 
Strand
Start bp743691 
End bp747098 
Gene Length3408 bp 
Protein Length1135 aa 
Translation table11 
GC content46% 
IMG OID644983019 
Productisoleucyl-tRNA synthetase 
Protein accessionYP_003140711 
Protein GI256819432 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0060] Isoleucyl-tRNA synthetase 
TIGRFAM ID[TIGR00392] isoleucyl-tRNA synthetase 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATTCA ACGAGTACAA ACACTTAGAC CTTACTAAGA TAGCAGAAGA AATATTGGCT 
TTCTGGAAAG CCACTAACAT CTTTGAGCAG AGTATCGCCT CACGTGAGGG CGCTATTCCG
TTCGTGTTTT TTGAAGGACC ACCATCTGCC AATGGCGTGC CTGGTATTCA CCACGTGATG
GCGCGCTCTA TTAAGGATAT TTTCTGCCGT TATAAAACTC AGAAAGGATT TCAAGTAAAA
CGCAAAGCAG GATGGGATAC CCACGGCTTG CCAGTAGAAC TCGGGGTAGA GAAAGAACTC
GGCATTACCA AAGAAGATAT AGGCAAGAAA ATAAGCGTTG AGGACTATAA CAAGGCTTGT
AAGGAAGCCG TGATGCGCTA TACCGATATC TGGAACGACC TTACCGAGAA AATAGGCTAC
TGGGTGGATA TGGACGACCC TTATATCACC TACAAACCTA AGTATATGGA AAGCGTGTGG
TGGCTTTTGA AACAACTGTA CAACAAGCAG TTGCTATACA AAGGCTACAC CATTCAGCCT
TATTCGCCTA AGGCAGGAAC AGGCTTGTCA TCACACGAGC TCAACCAACC TGGCTGCTAC
CGCGATGTGA GTGATACTAC GGTTGTGGCG CAGTTTAAAG TAAAAACATT AGTAGCAGCG
GCAAGTAAAA CATTGGGTAA CCCTACCGAA CCTATTCATA TCCTCGCTTG GACAACCACC
CCTTGGACGT TGCCTTCTAA CACCGCGCTT GCTGTGGGCA AAGAGATTGA CTATGTACTC
GTAAAAACAT TCAATCAATA TACTTTTGAG CCGATTACAA TCATCATTGG CAAACCGCTT
TTGGCAAAAC AATTCGGCAA AAAGTTCGTA GAGGGTGATG CAACTGCTTT GGCGGCTTAC
ACACCCGAAA GCAAAACTAT CCCTTATCAA ATTATAGGGG AATGCAAAGG TGCTGACCTT
GTGGGTACTA CTTATGAGCA ACTCATTCCT TGGTGCACTC CTGCCGAAAA TCCTACTGAG
GCTTTCCGTG TGATTGCAGG CGACTTTGTT ACCACTGATG ACGGTACCGG TATCGTGCAT
ATTGCGCCTA CTTTTGGTGC TGATGACGCC CGTGTAGCCA AAGAATACGG CGTGCCCCCA
ATGCTTGTGA AAGACGCGCA CGGCAATTTG ATTCCGTTAG TAGATTTGCA AGGAAAATTC
ATCACAGGAC ACAATATTCC TGAGGCTTTT GCCGGTAAAT ACATCAAAAA TGAGTATTAC
GATGCAGGGC AAGCGCCTGA AAAATCGTGG GATGTGAGCT TGGCTATCCT CCTCAAAGAA
GAAAACAAGG CTTTCAAAGT AGAGAAATAC GTACACAGCT ATCCGCACTG CTGGCGTACT
GATAAACCCG TGTTGTACTA CCCGCTCGAC TCGTGGTTTG TACGTGTAAC CGATTTCAAA
GAGCGTATGT TTGACCTCAA TGAAACCATC AACTGGAAAC CTAAAGCTAC CGGTGAAGGG
CGTTTTGGCA ACTGGCTCAA AAATGCGAAT GACTGGAACC TTTCGCGTTC GCGCTATTGG
GGTATCCCGC TACCTATTTG GCGTACAGAC GATAAGCAAG AGGAATTCTG CATAGGTTCG
GTAGAAGAAC TAAAAGCCGA AATACAAAAA GCTATCGCAG CAGGAGTGAT GACAGCCGAC
CCTTATAAAG ATTTTGTGGT AGGCGACAAC TCCGAAAGCA ATTACAACAA GGTAGATTTA
CACAAAAATA TAGTAGATAA CATAGTGCTT GTATCACCAT CGGGCAAGCC AATGCACCGC
GAAACTGACC TTATCGACGT ATGGTTTGAC TCGGGCTCTA TGCCGTATGC ACAATGGCAC
TATCCTTTTG AAAACAAGGA ATTTATCGAT AACCACACTG CTTATCCAGC CGACTTTATA
GCCGAAGGGG TAGACCAAAC ACGTGGTTGG TTCTATACAC TTCACGCAAT TGCTACTTCG
GTTTTTGACA GTGTGGCGTA CAAAAACGTA GTGTCTAACG GATTGGTGCT CGACAAGAAC
GGACAAAAGA TGTCGAAACG CTTGGGCAAT GCGGTAGACC CATTCACTAC TATAGCCGAG
TATGGCGCCG ATGCCACTCG CTGGTATATG ATTTCGAACG CAAACCCTTG GGATAACCTC
AAATTCGATT TGGAAGGGGT AGCTGAGGTG CGCCGCAAAT TCTTCGGTAC GCTCTACAAC
ACCTATTCAT TCTTTGCGCT TTATGCCAAT ACCGACAGCT TCACTTACGC TGAAGCGGAT
ATACCACTGG CTGAACGCCC TGAAATAGAT CGCTGGATAC TTTCGGAACT CAACACCCTC
ATCAAAGAAG TAGATGCCCT CTATGCCGAT TATGAGCCTA CCCGTGCTAC GCGTGCTATT
TCCGATTTTG TACAAGAAAA CCTCAGCAAC TGGTATGTGC GCTTGTCACG TCGCCGTTTC
TGGAAAGGAG AGTATGAAGC CGACAAGATA GCCGCTTACC AAACCCTTTA CACCTGCCTC
ATAACCATCG CTAAACTGAT GGCTCCTGTA GCGCCTTTCT ATGCCGATAG ATTGTACAAA
GACTTGGTGA GCGTTACCGG TAAAGAAAAT AAAGAAAGTG TACACCTCAC TGATTTCCCT
GTGGCTAACG AAAGTTACAT CGATAAGTCA TTGGAAAGCA AGATGCAGAA AGCACAGACC
ATCTCGTCCT TAGTACTATC ATTGCGCAAG AAAGAAAGCA TCAAGGTGCG TCAGCCACTG
CAAAAGATAA TGATACCGAT AGCCAACGCC ACTGAGCGTG CTGAAATAGA AGCCGTAGCA
AATCTTATCA AGCACGAGGT GAATGTGAAG GAAATAGAGC TTTTGGAAGA TGCCTCAGGT
ATATTGGTAA AACAAATCAA ACCGAACTTC AAGACCTTAG GACCTAAGTT TGGTAAAGAT
ATGAAAGCCA TTGCCACAGC GGTACAAGAA TTTGGTCAGC AGGAAATAGC ACAGTTTGAA
AAAGCACAAA CGTACAGCTT GCAACTGCCT GACAAAACGG TTACTTTGAG TTTGGACGAT
GTAGAAATCA GCACCCAAGA TATAGAAGGC TGGTTGGTTG CCACCGCTGG TAGTCTATTG
GTAGCATTAG ATATTCACAT CACCCCCGAA CTGCGCCAAG AAGGTATCGC TCGCGAGTTG
GTGAACCGCA TTCAGAATAT CCGCAAGGAC AATGATTACG ACATCACCGA CCGCATACAA
ATACGCCTCC AAGCGCACAC TGCCCTACAA GAGGCAGTAA CTGCCAACGA AGCTTACATC
AAGAACGAAA CCCTTACTAA CAGCATCTCT TTTGTAGATA GCCTGCCAGA GGGTGAAGAA
ATAGCATTCG ATGAAGTAAC GACAAGAATA GTTGTTAGCC GGTCGTAA
 
Protein sequence
MKFNEYKHLD LTKIAEEILA FWKATNIFEQ SIASREGAIP FVFFEGPPSA NGVPGIHHVM 
ARSIKDIFCR YKTQKGFQVK RKAGWDTHGL PVELGVEKEL GITKEDIGKK ISVEDYNKAC
KEAVMRYTDI WNDLTEKIGY WVDMDDPYIT YKPKYMESVW WLLKQLYNKQ LLYKGYTIQP
YSPKAGTGLS SHELNQPGCY RDVSDTTVVA QFKVKTLVAA ASKTLGNPTE PIHILAWTTT
PWTLPSNTAL AVGKEIDYVL VKTFNQYTFE PITIIIGKPL LAKQFGKKFV EGDATALAAY
TPESKTIPYQ IIGECKGADL VGTTYEQLIP WCTPAENPTE AFRVIAGDFV TTDDGTGIVH
IAPTFGADDA RVAKEYGVPP MLVKDAHGNL IPLVDLQGKF ITGHNIPEAF AGKYIKNEYY
DAGQAPEKSW DVSLAILLKE ENKAFKVEKY VHSYPHCWRT DKPVLYYPLD SWFVRVTDFK
ERMFDLNETI NWKPKATGEG RFGNWLKNAN DWNLSRSRYW GIPLPIWRTD DKQEEFCIGS
VEELKAEIQK AIAAGVMTAD PYKDFVVGDN SESNYNKVDL HKNIVDNIVL VSPSGKPMHR
ETDLIDVWFD SGSMPYAQWH YPFENKEFID NHTAYPADFI AEGVDQTRGW FYTLHAIATS
VFDSVAYKNV VSNGLVLDKN GQKMSKRLGN AVDPFTTIAE YGADATRWYM ISNANPWDNL
KFDLEGVAEV RRKFFGTLYN TYSFFALYAN TDSFTYAEAD IPLAERPEID RWILSELNTL
IKEVDALYAD YEPTRATRAI SDFVQENLSN WYVRLSRRRF WKGEYEADKI AAYQTLYTCL
ITIAKLMAPV APFYADRLYK DLVSVTGKEN KESVHLTDFP VANESYIDKS LESKMQKAQT
ISSLVLSLRK KESIKVRQPL QKIMIPIANA TERAEIEAVA NLIKHEVNVK EIELLEDASG
ILVKQIKPNF KTLGPKFGKD MKAIATAVQE FGQQEIAQFE KAQTYSLQLP DKTVTLSLDD
VEISTQDIEG WLVATAGSLL VALDIHITPE LRQEGIAREL VNRIQNIRKD NDYDITDRIQ
IRLQAHTALQ EAVTANEAYI KNETLTNSIS FVDSLPEGEE IAFDEVTTRI VVSRS