Gene Coch_0579 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCoch_0579 
Symbol 
ID8366996 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCapnocytophaga ochracea DSM 7271 
KingdomBacteria 
Replicon accessionNC_013162 
Strand
Start bp731048 
End bp732343 
Gene Length1296 bp 
Protein Length431 aa 
Translation table11 
GC content39% 
IMG OID644983006 
ProducttRNA(Ile)-lysidine synthetase 
Protein accessionYP_003140698 
Protein GI256819419 
COG category[D] Cell cycle control, cell division, chromosome partitioning 
COG ID[COG0037] Predicted ATPase of the PP-loop superfamily implicated in cell cycle control 
TIGRFAM ID[TIGR02432] tRNA(Ile)-lysidine synthetase, N-terminal domain
[TIGR02433] tRNA(Ile)-lysidine synthetase, C-terminal domain 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.992157 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATGTTG AGATTAAAAA ACTTAAGGAG AAAAAAATAT TGGTTGCCAT TAGTGGCGGT 
ATCGATAGCG TAGTACTCAC ACATTTACTG TACACTCACG GTATAGAACT GCTTTTAGCA
CACTGCAACT TTCAATTGCG CGGAAGAGAA AGTGACGACG ATGAGGCTTT TGTACGCACT
TTTGCTGCGG AACTTAGCGT TCCTTTAGAA GTAAAGCGTT TTGATACACA TCAATATGCG
AGTTCTCATC AGTTGAATAC TCAGTTGGCT GCTCGCGAAT TGCGCTATCA GTGGTTCGAT
GAGTTGGCAA GCACCCATTT CTGCGATGCT ATCGCTACGG CTCATCACGC CAATGATAAC
CTCGAAACCT TCTTTATTAA CCTTTCCAGA GGTAGTGGTT TAGAGGGGCT TTTAGGCATT
CCAGAAGAAA AAGATACTAT CATACGTCCG TTATTACAAT TCTCTCGTCA GCAGATATAC
GAATATGCGC AAGCAAAACG CCTTAAATGG CGTGAAGACA GCAGTAATGA AACAAATAAA
TACGTGCGCA ATGTAATTCG GCACGATATA ATACCGAAAT TAGCATTAGT ACACCCTAAT
TACTTAGAGA ATTTTAATCA AACGCAGGAA TACTTACACC AATCAGCGCG ATTTATAGAC
TTTTATATAG GAAAACTCAA AGAAACTTGT TTTGAAGGAC ATAATCCTAT ACAAATAGAC
ATAGAAAAAC TACAAGCTGT TCCTGAATTG GACTTTGTTT TACATAAACT CTTCTACCCT
TATGGATTTG GCAATGTAAA AGACCTCAAA AACCTATTGC TGAATGCCGA AGCGGGTAAA
CAAGTACTTT CGCCTACCCA TATCCTCATA AAAGACAACA CTTGTCTTTG GTTAAAGCCC
AATGAAGCAA AACGCAGTTT AAGTTTGCTG ATTTCGGAAG ATATGGCTGA GGTATACGAC
CCCGTTCATC TTCGTTTTGA ATTTATAGAG GGCAAGGTGA AAGTGAAAAA TCCAATCCCT
ACTGAAATAT ATGTAGATGC CGACAAATTG CAATACCCAC TTATGTTGCG CTATAAGAAA
GAAGGCGATG TATTTTATCC TTTTGGAATG AACAGCGAGA AGAAGCTCAG CAAGTTCTTT
ACCGATGAGA AATACACCCA AATAGAGCGC GAAGAGCAAG TGCTTTTATG TAGTGGTGAG
GATATTGTGT GGGTGGTAGG CAAGCGCTTA GACGACCGTT TTAAAATTAC CAAAGATACC
AAAAGAGCAG TAAAAATTAG CAAATTAGAG AATTAG
 
Protein sequence
MNVEIKKLKE KKILVAISGG IDSVVLTHLL YTHGIELLLA HCNFQLRGRE SDDDEAFVRT 
FAAELSVPLE VKRFDTHQYA SSHQLNTQLA ARELRYQWFD ELASTHFCDA IATAHHANDN
LETFFINLSR GSGLEGLLGI PEEKDTIIRP LLQFSRQQIY EYAQAKRLKW REDSSNETNK
YVRNVIRHDI IPKLALVHPN YLENFNQTQE YLHQSARFID FYIGKLKETC FEGHNPIQID
IEKLQAVPEL DFVLHKLFYP YGFGNVKDLK NLLLNAEAGK QVLSPTHILI KDNTCLWLKP
NEAKRSLSLL ISEDMAEVYD PVHLRFEFIE GKVKVKNPIP TEIYVDADKL QYPLMLRYKK
EGDVFYPFGM NSEKKLSKFF TDEKYTQIER EEQVLLCSGE DIVWVVGKRL DDRFKITKDT
KRAVKISKLE N