Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Coch_0579 |
Symbol | |
ID | 8366996 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Capnocytophaga ochracea DSM 7271 |
Kingdom | Bacteria |
Replicon accession | NC_013162 |
Strand | - |
Start bp | 731048 |
End bp | 732343 |
Gene Length | 1296 bp |
Protein Length | 431 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 644983006 |
Product | tRNA(Ile)-lysidine synthetase |
Protein accession | YP_003140698 |
Protein GI | 256819419 |
COG category | [D] Cell cycle control, cell division, chromosome partitioning |
COG ID | [COG0037] Predicted ATPase of the PP-loop superfamily implicated in cell cycle control |
TIGRFAM ID | [TIGR02432] tRNA(Ile)-lysidine synthetase, N-terminal domain [TIGR02433] tRNA(Ile)-lysidine synthetase, C-terminal domain |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.992157 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATGTTG AGATTAAAAA ACTTAAGGAG AAAAAAATAT TGGTTGCCAT TAGTGGCGGT ATCGATAGCG TAGTACTCAC ACATTTACTG TACACTCACG GTATAGAACT GCTTTTAGCA CACTGCAACT TTCAATTGCG CGGAAGAGAA AGTGACGACG ATGAGGCTTT TGTACGCACT TTTGCTGCGG AACTTAGCGT TCCTTTAGAA GTAAAGCGTT TTGATACACA TCAATATGCG AGTTCTCATC AGTTGAATAC TCAGTTGGCT GCTCGCGAAT TGCGCTATCA GTGGTTCGAT GAGTTGGCAA GCACCCATTT CTGCGATGCT ATCGCTACGG CTCATCACGC CAATGATAAC CTCGAAACCT TCTTTATTAA CCTTTCCAGA GGTAGTGGTT TAGAGGGGCT TTTAGGCATT CCAGAAGAAA AAGATACTAT CATACGTCCG TTATTACAAT TCTCTCGTCA GCAGATATAC GAATATGCGC AAGCAAAACG CCTTAAATGG CGTGAAGACA GCAGTAATGA AACAAATAAA TACGTGCGCA ATGTAATTCG GCACGATATA ATACCGAAAT TAGCATTAGT ACACCCTAAT TACTTAGAGA ATTTTAATCA AACGCAGGAA TACTTACACC AATCAGCGCG ATTTATAGAC TTTTATATAG GAAAACTCAA AGAAACTTGT TTTGAAGGAC ATAATCCTAT ACAAATAGAC ATAGAAAAAC TACAAGCTGT TCCTGAATTG GACTTTGTTT TACATAAACT CTTCTACCCT TATGGATTTG GCAATGTAAA AGACCTCAAA AACCTATTGC TGAATGCCGA AGCGGGTAAA CAAGTACTTT CGCCTACCCA TATCCTCATA AAAGACAACA CTTGTCTTTG GTTAAAGCCC AATGAAGCAA AACGCAGTTT AAGTTTGCTG ATTTCGGAAG ATATGGCTGA GGTATACGAC CCCGTTCATC TTCGTTTTGA ATTTATAGAG GGCAAGGTGA AAGTGAAAAA TCCAATCCCT ACTGAAATAT ATGTAGATGC CGACAAATTG CAATACCCAC TTATGTTGCG CTATAAGAAA GAAGGCGATG TATTTTATCC TTTTGGAATG AACAGCGAGA AGAAGCTCAG CAAGTTCTTT ACCGATGAGA AATACACCCA AATAGAGCGC GAAGAGCAAG TGCTTTTATG TAGTGGTGAG GATATTGTGT GGGTGGTAGG CAAGCGCTTA GACGACCGTT TTAAAATTAC CAAAGATACC AAAAGAGCAG TAAAAATTAG CAAATTAGAG AATTAG
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Protein sequence | MNVEIKKLKE KKILVAISGG IDSVVLTHLL YTHGIELLLA HCNFQLRGRE SDDDEAFVRT FAAELSVPLE VKRFDTHQYA SSHQLNTQLA ARELRYQWFD ELASTHFCDA IATAHHANDN LETFFINLSR GSGLEGLLGI PEEKDTIIRP LLQFSRQQIY EYAQAKRLKW REDSSNETNK YVRNVIRHDI IPKLALVHPN YLENFNQTQE YLHQSARFID FYIGKLKETC FEGHNPIQID IEKLQAVPEL DFVLHKLFYP YGFGNVKDLK NLLLNAEAGK QVLSPTHILI KDNTCLWLKP NEAKRSLSLL ISEDMAEVYD PVHLRFEFIE GKVKVKNPIP TEIYVDADKL QYPLMLRYKK EGDVFYPFGM NSEKKLSKFF TDEKYTQIER EEQVLLCSGE DIVWVVGKRL DDRFKITKDT KRAVKISKLE N
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