| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Coch_0465 |
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| Symbol | secA |
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| ID | 8366871 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Capnocytophaga ochracea DSM 7271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013162 |
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| Strand | + |
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| Start bp | 593532 |
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| End bp | 596894 |
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| Gene Length | 3363 bp |
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| Protein Length | 1120 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 644982886 |
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| Product | preprotein translocase subunit SecA |
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| Protein accession | YP_003140589 |
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| Protein GI | 256819310 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0653] Preprotein translocase subunit SecA (ATPase, RNA helicase) |
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| TIGRFAM ID | [TIGR00963] preprotein translocase, SecA subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCATTA TCAATTCCCT TATTAAAATT TTCGTTGGCG ATAAAGCCAA AAACGACCTA
AAAGCAATCC AACCTATCGT TGAAAAAATA AAAACTTACG CCTCTCAGTT AGAAAATATC
TCTAATGATG AGTTGCGCGC AAAAACTATT GAGTTTAAGC AAAGAATAAA AGACGCTCGC
GCCGAGTTCG ATACTAAAAT AGCCGAACTC GAAGCCCAAG CAAACGCTAC TGACGATATC
GATGCTAAAG AAGACCTTTA TGCTGAAGTA GACAAACTCA ACGGCGAAGC CTATCAAGTC
TCCGAAAAAG TATTAAACGA GATCCTTCCC GAAGCCTTCG CAACAATGAA GGAAACTACC
CGTCGTTTTG CTAATAACGA AACTATTACC GTAACTGCTA CCGAGCACGA CCGCGAACTA
TCGGCTACCC ACGACTATGT GACGATTGAG GGCGATAAAG CTGTATGGAA AAACCACTGG
GACGCCGCTG GTAAAGATGT TACTTGGGAT ATGGTACACT ACGATGTACA GCTCATTGGA
GGTATTGCCC TTCACCAAGG TAAGATTGCC GAAATGCAAA CAGGGGAAGG TAAAACCCTC
GTGGCTACCT TGCCTGTCTA CCTCAATGCC CTAACGGGGA ATGGGGTGCA CCTCGTAACC
GTGAACGACT ATTTGGCACG CCGAGATAGT GCGTGGATGG GACCTTTATT TGAGTTCCAC
GGTTTGCGTG TGGATTGTAT CGACAACCAC CAACCTAACT CCGAAGCGCG TCGTCGTGCC
TACAACGCCG ATATTACCTA TGGAACTAAC AACGAATTTG GTTTCGACTA CCTCCGCGAC
AATATGGCGC ACACTCCCGA AGATTTGGTG CAACGCTCTC ACAACTATGC CATTGTCGAT
GAGGTCGATT CTGTATTGAT AGACGATGCT CGTACACCGC TCATCATCTC AGGTCCTACC
CCTAAAGGTG AATTGCACGA GTTCAACGAA CTGAAACCTT TGGTAGAAAA TTTGGTAAAC
AAACAGCGTA CTTACCTCAC CAAAGTATTA GCCGATGCCC GCAAACTCAT TGCCGAAGGG
GATACCAAAG AAGGGGGATT CCAACTCTTG CGCGTGTATC GTGGGTTACC TAAAAACAAA
GCGCTCATCA AGTTCCTCAG TGAAGAAGGG GTAAAACAAC TGCTCCAAAA AACTGAAAAT
TACTATATGC AGGATAACAA TCGCGAAATG CCAAAGGTAG ATGCCGAATT GTACTTCGTG
ATTGATGAGA AAAACAACCA AATCGAGCTT ACCGATAAAG GGTTTGCTGA TATTGCCTAC
GATGGTGATA AAGATTTCTT TGTTTTACCT GATATTGGGG TAGAAATTGC CAATATTGAG
AACCAAGGTC TTCCTATTGA AGAAGAAGCT AAACTAAAAG ATAAATTATT CCAAGATTTT
AGCGTAAAAA GCGAACGCAT TCACACCCTT AACCAATTGC TCAAAGCCTA CACTCTCTTT
GAAAAAGATG TAGAGTATGT AGTAATTGAT AACAAAGTGC TCATCGTCGA TGAACAAACA
GGTCGTATTA TGGACGGTCG TCGTTATTCC GATGGTTTGC ACCAAGCGAT TGAAGCCAAA
GAGAATGTGA AAATTGAGGC TGCTACCCAA ACCTATGCGA CTATTACCTT GCAAAACTAC
TTCCGTATGT ATAGCAAGTT AGCAGGTATG ACGGGTACTG CTATCACCGA AGCGGGTGAG
TTCTGGGAAA TCTATAAACT CGATGTAATG GAAATCCCTA CCAACCGTCC TATCGCTCGT
AAAGACCACA ACGACCTTAT CTATAAAACC AAACGCGAGA AATACAACGC CGTAATCGAT
GAGGTAGTAA AACTTTCCGA AGCTGGTCGC CCTGTGTTGA TAGGTACTAC TTCTGTGGAA
GTATCCGAAC TCCTCAGCCG TATGCTTACA ATGCGCAAGG TGAAACACAA TGTATTGAAT
GCGAAATTAC ATAAAAAAGA AGCTGAAATC GTAGCCGAAG CCGGACATAG TGGTGTGGTA
ACCATCGCAA CCAATATGGC GGGACGTGGT ACCGATATCA AGTTAACCCC CGAAGTAAAA
GCTGCAGGAG GTTTGGCAAT TATAGGTACC GAACGCCACG ATTCTCGTCG TGTCGATCGT
CAGTTGCGCG GTCGTTCTGG TCGTCAAGGT GACCCTGGTA GCTCACTCTT CTTCGTTTCT
CTCGAAGATA ACCTAATGCG CCTCTTCGGT TCTGAACGTA TCGCCCGATT AATGGATAGC
TTAGGTCATA AAGAAGGTGA TGTAATTCAG CACTCTATGA TGACCAAACG CATCGAGGCA
GCTCAGAAAA AGGTAGAAGA AAACAACTTC GGTATGCGTA AACGTCTGTT GGAGTACGAC
GACGTGATGA ACGCACAACG CAAGCAAATT TATAAACGCC GTCGCCACGC TCTTGAAGGT
GAACGCCTAA AAGTGGATTT GGCAAATATG ATATTCGATA CTTGTGAGAA TATAGTAGAG
AGCAACAAAG GTGGAAATAA CTACAAGAAT TTCACTTTCG AGCTCATCAA ATATTTCTCA
CTGAAAACAC AAATTTCAGA AGCTGAATTT GCTAAACAAT CGCCAAACGA CCTTACTTTT
GCCTTGTATC ACGAAGCGCT CAAACACTAT CAGGAAAAAG CTGAACGCAG TGCCGCTCAA
GCCTTCCCAG TAATTAAAGA CGTATACGAA AATCCTAATA ATACTTATGA GCGTATCGTC
GTGCCTTTCA CCGATGGCGA AAAGATGCTC AACATCGTAA CCGACCTCAA AGAGGCGTAC
GAAACCCAAG GTAAGAAACT CGTAAGCGAT TTCGAGAAGA ATATTACGCT TGGCATCATC
GACGAGGAAT GGAAAACGCA TCTCCGCCGT ATGGACGAGC TTAAACAATC TGTACAATTA
GCGGTACACG AACAGAAAGA CCCGCTACTT ATTTATAAGT TTGAAGCCTA TCAGTTGTTC
AAAGCTATGG TCGATAAGGT AAACAAAGAG ATTATCTCTT TCTTGTTCAA AGCCGAGTTA
CCTACTCAAA ATCCACCTGT ACAGGAAGCC CACGCGCCAC AACGCACTCG TGAGCACTAC
CAAACCAATA AGGAAGAAGC CCTCAACAGC GATGAGATGG CACAACGCGC CCGTGAAGTA
GGGCAACAAG CCTCACAGCG CCGTTCGGTA GTAGAGACCA TCGTACGCCA ACAACCTAAA
ATTGGTCGTA ATGATAAGGT AGTAATCCAA AACATCCGCA CCGGTGAACG CAAAGAGCTC
AAGTTCAAAC AAGCAGACCC CCTAATAAAC AGCGGAGAAT GGATTTTAGT ATCCAATAAA
TAG
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| Protein sequence | MSIINSLIKI FVGDKAKNDL KAIQPIVEKI KTYASQLENI SNDELRAKTI EFKQRIKDAR
AEFDTKIAEL EAQANATDDI DAKEDLYAEV DKLNGEAYQV SEKVLNEILP EAFATMKETT
RRFANNETIT VTATEHDREL SATHDYVTIE GDKAVWKNHW DAAGKDVTWD MVHYDVQLIG
GIALHQGKIA EMQTGEGKTL VATLPVYLNA LTGNGVHLVT VNDYLARRDS AWMGPLFEFH
GLRVDCIDNH QPNSEARRRA YNADITYGTN NEFGFDYLRD NMAHTPEDLV QRSHNYAIVD
EVDSVLIDDA RTPLIISGPT PKGELHEFNE LKPLVENLVN KQRTYLTKVL ADARKLIAEG
DTKEGGFQLL RVYRGLPKNK ALIKFLSEEG VKQLLQKTEN YYMQDNNREM PKVDAELYFV
IDEKNNQIEL TDKGFADIAY DGDKDFFVLP DIGVEIANIE NQGLPIEEEA KLKDKLFQDF
SVKSERIHTL NQLLKAYTLF EKDVEYVVID NKVLIVDEQT GRIMDGRRYS DGLHQAIEAK
ENVKIEAATQ TYATITLQNY FRMYSKLAGM TGTAITEAGE FWEIYKLDVM EIPTNRPIAR
KDHNDLIYKT KREKYNAVID EVVKLSEAGR PVLIGTTSVE VSELLSRMLT MRKVKHNVLN
AKLHKKEAEI VAEAGHSGVV TIATNMAGRG TDIKLTPEVK AAGGLAIIGT ERHDSRRVDR
QLRGRSGRQG DPGSSLFFVS LEDNLMRLFG SERIARLMDS LGHKEGDVIQ HSMMTKRIEA
AQKKVEENNF GMRKRLLEYD DVMNAQRKQI YKRRRHALEG ERLKVDLANM IFDTCENIVE
SNKGGNNYKN FTFELIKYFS LKTQISEAEF AKQSPNDLTF ALYHEALKHY QEKAERSAAQ
AFPVIKDVYE NPNNTYERIV VPFTDGEKML NIVTDLKEAY ETQGKKLVSD FEKNITLGII
DEEWKTHLRR MDELKQSVQL AVHEQKDPLL IYKFEAYQLF KAMVDKVNKE IISFLFKAEL
PTQNPPVQEA HAPQRTREHY QTNKEEALNS DEMAQRAREV GQQASQRRSV VETIVRQQPK
IGRNDKVVIQ NIRTGERKEL KFKQADPLIN SGEWILVSNK
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