Gene Coch_0459 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCoch_0459 
Symbol 
ID8366865 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCapnocytophaga ochracea DSM 7271 
KingdomBacteria 
Replicon accessionNC_013162 
Strand+ 
Start bp587414 
End bp588424 
Gene Length1011 bp 
Protein Length336 aa 
Translation table11 
GC content43% 
IMG OID644982880 
Product3-oxoacyl-(acyl-carrier-protein) synthase III 
Protein accessionYP_003140583 
Protein GI256819304 
COG category[I] Lipid transport and metabolism 
COG ID[COG0332] 3-oxoacyl-[acyl-carrier-protein] synthase III 
TIGRFAM ID[TIGR00747] 3-oxoacyl-(acyl-carrier-protein) synthase III 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTATATC GTTCAAGAAT TAAGGGATTA GGATTTTACG TCCCTGAAAA CGTAGTTACT 
AACGACGACC TATCCAAACT AATGGATACC AGCGATGAAT GGATTCAAGA GCGTACCGGT 
ATTCAGCAAC GTCGTCACGC ACTAAAAGGT AGTGATACTA CTACCTCAAT GGGTGTAAAA 
GCAAGTTTGA AAGCTATTGA AGCTGCTAAA ATCAATAAAG AAGAAATCGA CTTTATTGTA 
TTTGCAACCC TCAGTCCCGA CTTCTTTTTC CCAGGTTGTG GGGTATTGGT ACAAAAAGAA 
TTGGGTTTAC CTACTGTGGG AGCTCTCGAT ATTCGCAACC AATGTTCGGG CTTTATCTAT 
GCCCTTTCAG TAGCCGACCA GTATATCAAA ACGGGTATGT ACAAAAATAT CCTTGTGATA 
GGAGCTGAAA CCCAATCCCC CGCACTGGAT ATGACCACTC GCGGTCGCAA TATGGCAGTG 
CTCTTTGGCG ATGGAGCAGG TGCTGCTATC GTTTCTCGTT CTGATGACCC CGAGCGCGGT 
ATTCTCTCCA CTCACTTGCA TAGCCAAGGT GAACACGCCG AACAATTAGC TATGATTACC 
CCAGGGGTAG GCACCAAATG GGTAACCGAA TTATTGGCAG AAAACGACCC TGATGATGTG 
AGTTATTACC CTAATATGAA CGGTCAGTTT GTATTTAAAA ATGCTGTGGT TCGCTTTGCG 
GAAGTGATAG AAGAGGGATT GAAAAGCAAT GGTCTTTCTC ACAAAGATAT TAATATGTTG 
ATTCCTCACC AAGCTAATTT GCGTATTTCA CAGTTTGTAC AACACCAATT CAAACTCACC 
GATGAACAAA TATTTAACAA TATAATGAAG TACGGTAACA CTACCGCAGC TTCTATACCT 
ATCGCCCTTA CCGAAGCAGT TCAAAAAGGA AAAATCAAGG ACGGAGACCT CGTAGTAATT 
GCTGCCTTTG GTAGTGGCTT TACTTGGGCA AGTGCTATCA TCCGTTGGTA G
 
Protein sequence
MLYRSRIKGL GFYVPENVVT NDDLSKLMDT SDEWIQERTG IQQRRHALKG SDTTTSMGVK 
ASLKAIEAAK INKEEIDFIV FATLSPDFFF PGCGVLVQKE LGLPTVGALD IRNQCSGFIY 
ALSVADQYIK TGMYKNILVI GAETQSPALD MTTRGRNMAV LFGDGAGAAI VSRSDDPERG 
ILSTHLHSQG EHAEQLAMIT PGVGTKWVTE LLAENDPDDV SYYPNMNGQF VFKNAVVRFA 
EVIEEGLKSN GLSHKDINML IPHQANLRIS QFVQHQFKLT DEQIFNNIMK YGNTTAASIP 
IALTEAVQKG KIKDGDLVVI AAFGSGFTWA SAIIRW