Gene Coch_0422 details

Gene Information

• Locus tag: Coch_0422
• Symbol: rplK
• ID: 8366828
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Capnocytophaga ochracea DSM 7271
• Kingdom: Bacteria
• Replicon accession: NC_013162
• Strand: +
• Start bp: 532845
• End bp: 533282
• Gene Length: 438 bp
• Protein Length: 145 aa
• Translation table: 11
• GC content: 44%
• IMG OID: 644982843
• Product: 50S ribosomal protein L11
• Protein accession: YP_003140546
• Protein GI: 256819267
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0080] Ribosomal protein L11
• TIGRFAM ID: [TIGR01632] 50S ribosomal protein L11

Plasmid Coverage information

• Num covering plasmid clones: 0
• Plasmid unclonability p-value: 0.00000000957396
• Plasmid hitchhiking: No
• Plasmid clonability: unclonable

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCAAAAG AAGTTAGTAA AGTAGTTAAA CTACAAGCTC GGGGAGGTCA AGCGAATCCT 
TCGCCACCAA TTGGACCCGC ATTAGGTGCT GCCGGTGTTA ATATTATGGA GTTCTGCAAG 
CAGTTCAACG CACGTACGCA GGACAAACAA GGGAAAGTAC TTCCTGTGGT TATCACCGTT 
TACAAAGACA AGTCATTCGA CTTTGTTATC AAGACTGCGC CTGCTGCTGT TCAGCTATTG 
GAAGCCGCTA AGGTTAAAGG AGGTTCCGGA GAGCCAAACC GTAAGAAAGT AGCAAGTATC 
ACTTGGGAAC AAGTGAGAGC AATTGCAGAA GACAAAATGC CGGATTTGAG TGCATTTACA 
ATTGAATCTG CAATGAGTAT GGTTGCTGGT ACGGCACGTT CAATGGGTAT TACAGTAACT 
GGAGAAAAAC CTTTTTAA 

 

Protein sequence

MAKEVSKVVK LQARGGQANP SPPIGPALGA AGVNIMEFCK QFNARTQDKQ GKVLPVVITV 
YKDKSFDFVI KTAPAAVQLL EAAKVKGGSG EPNRKKVASI TWEQVRAIAE DKMPDLSAFT 
IESAMSMVAG TARSMGITVT GEKPF