Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Coch_0414 |
Symbol | engB |
ID | 8366820 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Capnocytophaga ochracea DSM 7271 |
Kingdom | Bacteria |
Replicon accession | NC_013162 |
Strand | - |
Start bp | 524039 |
End bp | 524641 |
Gene Length | 603 bp |
Protein Length | 200 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 644982835 |
Product | ribosome biogenesis GTP-binding protein YsxC |
Protein accession | YP_003140538 |
Protein GI | 256819259 |
COG category | [R] General function prediction only |
COG ID | [COG0218] Predicted GTPase |
TIGRFAM ID | [TIGR00231] small GTP-binding protein domain [TIGR03598] ribosome biogenesis GTP-binding protein YsxC/EngB |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATAAAAA AAGCTGAATT TGTGATGAGT AACTCTCAGG TGAGTAAGTG CCCAAAGGAT AACTTACCTG AGTATGCTTT TATAGGGCGT TCTAATGTTG GGAAATCGTC GCTCATCAAT ATGCTTACCA ATCACAAGAA TTTGGCTAAA ACTTCGGGTC GTCCGGGGAA AACTCAACTC ATCAATCACT TTAAAATAGA CAATAGTTGG TTTTTAGTAG ACCTCCCTGG TTATGGGTAT GCAAGAGTGT CCAAAGAAAC TAAAAAGGTA TTTCAGCAAT TTATTACTAA ATATTTTGAG GAGCGGCAAC AATTGGTATG TGCATTTGTA TTAGTAGATG TGCGCCACGA ACCTCAGAAG ATAGATGTAG AGTTTATGCA ATGGTTAGGC GAACACGGCA TTCCGTTTGC TATTGTCTTC ACCAAAGCCG ATAAACTCAA ACCTTTAGCT ATTGAGCGCA ATATAGCTGC TTATCAACAA GTACTCCTCG AAACTTGGGA AGAATTTCCA CCCTACTTCA TCACTTCAGC CGAAAACAAA ACCGGCAAAG AAGAACTTAC CCATTACATT GAACAAATCA ATAAATCAAT TGACAATTGT TAA
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Protein sequence | MIKKAEFVMS NSQVSKCPKD NLPEYAFIGR SNVGKSSLIN MLTNHKNLAK TSGRPGKTQL INHFKIDNSW FLVDLPGYGY ARVSKETKKV FQQFITKYFE ERQQLVCAFV LVDVRHEPQK IDVEFMQWLG EHGIPFAIVF TKADKLKPLA IERNIAAYQQ VLLETWEEFP PYFITSAENK TGKEELTHYI EQINKSIDNC
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