Gene Coch_0359 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCoch_0359 
Symbol 
ID8366765 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCapnocytophaga ochracea DSM 7271 
KingdomBacteria 
Replicon accessionNC_013162 
Strand
Start bp449847 
End bp452873 
Gene Length3027 bp 
Protein Length1008 aa 
Translation table11 
GC content42% 
IMG OID644982780 
Productpeptidase M12B ADAM/reprolysin 
Protein accessionYP_003140483 
Protein GI256819204 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.199443 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAACA TCATTACAAT AGGATTGCTA ATAGGGTGTG TGTTCTTTGG GAAAGCACAG 
GACGAGGCGG ATAAATGGCT AAAAGCAGTA TCGGCACAAC AAGGTATTGC CATTGACTGG
CAGGAGCGCA AAACCTCTCT TGCCTCAGAG GGTATTCGCT CTTTTGTGGG TTACTACCAA
GACAATTTTG TAGCGACCCT TTCGGTAGGA GGACAGAGCG TGTCAGGGAG TTTTCACTAC
CGAGATACCT CGTATGAGAT AAACGAGCAA AAAGGACAAT TGCTCTTTTC GCCTAATAAA
GATTTCCGAT GTGGCACTAC CGATACGCCT CATTTGCACC CAAGCCTTTC GACAGCACGC
CCTGCGATAT TAGCCGAAGA AACCGCTCCT ACCATTGCCA ACACACAAAC ACTAAGGGTA
TACCGCTTGG CAATGCATAT CCCTTATAGC ACCTTCAGCA CAGAACACTT AGAGAAAAAC
ATACAAAAAG TAAAAACGTT TTGGGCAGAT ACTGAAAACT TCCTAAATGA AGTGTATATA
CGCGATTTGG GAGTGCGTTT TGAATTAGTA AACGATGAGC GTCTCATCAT CAAAGACGAA
AGCAAAGAGA CTTTTGCAAG CTTTCACAAT GCCGATTACG TTAAGGATCA TTCAACAAAG
GTTATCAACG AACTTATAGG AGAAAATAGT TATGACGTGG GTATCTCTCT TGCATATACC
GCTTCCTTAA AAAAAGGAGT CAGAGGATTG GCTTATCTTA AAGGTGTTTA TCAGGCAAAT
ACCAAAGCTG ATGCCGTAGC AGTACTTACC AAAGAAGTCA TAGCTCACGA AATCGGACAC
TTATTCGGGG GTAAACACAC TTTTGGTAGC TATAAGGGCT CAGAAGCCTA CGATAGTGAA
AAGACAGAGT ATGACAGAGG TACTTCGGTG ATGAGCTATG GCAGTCCGCG TGATTTCTTC
TCGCTGTCGA GCATTCAGCG CATACGGGAA CTATTGACGA AAGTACCCGT GAAAGCTCAC
GACAAGACTT TCACTACTCA AGCTCCTCGC ATAGACCACA GCAAGATTAA AAGTCATTAT
ACGATTCCCA AGGGTACTTT CTTTCAATTC TATATTCCTG CTATCGACCC CGATAGTGCA
GAACTGCTAT ACGCCGTAAA CCAACACGAT GTGCGCAATG GTGATGAAAC CCCAATAACG
CAATACATTA TCTACAAACC TACTCCAGCT AACCCTGTAA CTATTAAAAC AGAGTACCAC
AAAGACTCAG GTAGTGTAAT AGCCAATAGT GGCTTAGCAC AACAAACTAC GGGTACTTTT
ACCTTTTGGT TGGGAGTGAG CGATGCCCCA CTCCAACCGT CAGCCGACTA TATAGTACAA
TACGATTTGG CTGAAACCAA AGTAACGGTA AAAGACGGTA CCCCCTTCAA AATTACGACT
ACCCCAAAAA ACGAATACAA AGGAGGCACT CAACTTACCC TTAGTTGGAA CGTAGATAAT
ACTATTTTCA AAGACACCAA AGTGCGTATC CTGCTCTCAG ATGATTTAGG TAAGACGTTT
AAACATATGG TAGTAGCAGA AGCTGATAAC AACGGCAGTA AAGAAATTAC CTTGCCTAAT
ATTAGCACTA CCCAAGCCGT CTTAAAAGTA GAAGTAATCG ATGGTTTAGC CTTTGACCTT
ACTAACTACA ACCCTAAAAG CGGTGGTTTT ACCATTGAAA AGAACCCCGC CCTCCCCGAA
CCTCTCCTTT GGGCATCACT TCCTAATCAT CTTACCCTTT CTTGTGAACA ATCTATTCCA
GCAGTAGTAT TGCCTACAGT TACAGGGGGG TGTACTCCTG TGGTTACCCT TCAAAAAGAA
GAACGCATCA AAGGCAATTG TGACTATACT TATACTCTCA AACGCATTTT TATAGCTACC
GACACTTGTA ACCAAACGCT TACTTATACT CAAACTATTA GCGTAACAGA TAAAACTCGC
CCTACTTTTG TAGGTGTTTT ACCCCAAAAT ATGAGTATTA AAGAAGGTGA AACAATCCCT
ACCCAAGTAA CGCTTACCGC TACTGATAAT TGTGGCACCG CTACTGTTAC GTCTTCTCAT
AAAGAAGTAA AAACTAATGG AAAAATCTCT CAGCTTATCT ATATGTGGGA AGCTAAAGAT
GCTTGTGGCA ATGTTACTAC CCACCAGCAA ATCATTACCA TTGTGCCTAA AACAACTCCT
ATACCTCTCA CTTGGGCAAC ACTTCCTAAC AATATAACCG TAGATTGTGC CAAAGCTATT
CCCGCTGTGC AAACCCCCAC CACACAAGGA GGCTGTGCTA AGGTAGTGAT TACTCGCGCC
GATAAAGAAC TTAACAAGCA ATGCCTTAAC AACTTCACGT TAGAGCGTAC TTTTACCGCT
TCCGATGGTT GCACAACTCT TACCCATACC CAGCGCATTA CCGTAGCCGA TACTACCCCA
CCTACTTTTG TAGGGACTTT ACCTCAAAAC CTCACGATTA AAGAAGGGAC ACCCGTCCCC
CAACAACAGA GTATTTCAGC AGAAGATACT TGTGCAGGAC AACCTACCGT TACAATCTCT
CCAAAAGAAG AAACTCTCAC TAACGGAAAG CTCTCTAAGG TCGTCTATAA GTGGGTAGCG
CGCGATGTGT GTGGCAACGA AAGAGTGCAT ACGCAAACTA TTATCATTAC CCCAGTAATA
CCACAACCAC CTACACCGCC AATAGTTCCT TCTGTTAAAG AAGTGGTGAT TTACAATGCC
GTTTCTACTG AAAAAGGCTC TGATAACTAT TTCAGAATAG AAAATACAGA TGAAAACCGA
CCTATTACCT TACTTATTTT TGATGAAATG GGCTTGAAAG TATATGAAAG TAACCATTAT
CAACAAAAAG GTGAATATTT TAGAGGCTAT CCTAATGTAA AAGGAGTGAT AGGTAGCAAA
CGCTTAGCAG GTACTTATTT CTATGTGGTT ACCTATTATT TCAAAGGACA GCAAGAAACA
AAAAAGGGAT TCCTATATGT AAGATAA
 
Protein sequence
MKNIITIGLL IGCVFFGKAQ DEADKWLKAV SAQQGIAIDW QERKTSLASE GIRSFVGYYQ 
DNFVATLSVG GQSVSGSFHY RDTSYEINEQ KGQLLFSPNK DFRCGTTDTP HLHPSLSTAR
PAILAEETAP TIANTQTLRV YRLAMHIPYS TFSTEHLEKN IQKVKTFWAD TENFLNEVYI
RDLGVRFELV NDERLIIKDE SKETFASFHN ADYVKDHSTK VINELIGENS YDVGISLAYT
ASLKKGVRGL AYLKGVYQAN TKADAVAVLT KEVIAHEIGH LFGGKHTFGS YKGSEAYDSE
KTEYDRGTSV MSYGSPRDFF SLSSIQRIRE LLTKVPVKAH DKTFTTQAPR IDHSKIKSHY
TIPKGTFFQF YIPAIDPDSA ELLYAVNQHD VRNGDETPIT QYIIYKPTPA NPVTIKTEYH
KDSGSVIANS GLAQQTTGTF TFWLGVSDAP LQPSADYIVQ YDLAETKVTV KDGTPFKITT
TPKNEYKGGT QLTLSWNVDN TIFKDTKVRI LLSDDLGKTF KHMVVAEADN NGSKEITLPN
ISTTQAVLKV EVIDGLAFDL TNYNPKSGGF TIEKNPALPE PLLWASLPNH LTLSCEQSIP
AVVLPTVTGG CTPVVTLQKE ERIKGNCDYT YTLKRIFIAT DTCNQTLTYT QTISVTDKTR
PTFVGVLPQN MSIKEGETIP TQVTLTATDN CGTATVTSSH KEVKTNGKIS QLIYMWEAKD
ACGNVTTHQQ IITIVPKTTP IPLTWATLPN NITVDCAKAI PAVQTPTTQG GCAKVVITRA
DKELNKQCLN NFTLERTFTA SDGCTTLTHT QRITVADTTP PTFVGTLPQN LTIKEGTPVP
QQQSISAEDT CAGQPTVTIS PKEETLTNGK LSKVVYKWVA RDVCGNERVH TQTIIITPVI
PQPPTPPIVP SVKEVVIYNA VSTEKGSDNY FRIENTDENR PITLLIFDEM GLKVYESNHY
QQKGEYFRGY PNVKGVIGSK RLAGTYFYVV TYYFKGQQET KKGFLYVR