Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Coch_0329 |
Symbol | |
ID | 8366735 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Capnocytophaga ochracea DSM 7271 |
Kingdom | Bacteria |
Replicon accession | NC_013162 |
Strand | + |
Start bp | 413153 |
End bp | 415441 |
Gene Length | 2289 bp |
Protein Length | 762 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 644982750 |
Product | hypothetical protein |
Protein accession | YP_003140453 |
Protein GI | 256819174 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAATAACA TTCACTTTTT CGGTGTAAGG CATCTGTCGC CTTCGGCAGC CTATCATTTA ATTGCCTTCT TAGAGGAAAA CAACCCCAAG TGTATTCTCA TCGAAGGTCC TGCCGATGCT ACCCCTCTGA TATCTCAAAT AGCGCAAAAA GGGGTAAAAC CTCCTATCGC TATGCTGGGC TATACTACCG AATTGCCTAT CGAAACAGTG CTTTATCCAT TGGCATCTTA TTCTCCCGAA TATCAAGCAA TATGTTGGGG AGTAAAGAAG AAGGTAACAC TTCGTTTCAT CGATTTGCCT TCGGAGAATA TGCTGAAATT GAAGCAGGAG CAACGCACGG AGGAAGAAGC CGAAAAAGCC AAAGAATTTT ATCTCTACCA TAATACCCTC TACAAGCAAA TAGCCGAGGA GGGGGGCGAA ACCGACTATG AAGATTATTG GGAACGCCAT TTTGAACACA ATCTCAATCC TGATGCTTTT GCACCCACAC TTGCCTTACA ATCGGGTGAA ATGCGCCAAA TGGTCATAGA TAAAGAATAT GAAAACGCGC CTTTCGATTT CTCGTATAAT CTCATTCGTG AGGCATATAT GAAACGTGAG ATTGCTAAGG CTTGCACCGA GTTCAAACCC GAAGAAATAG TAGTAATCGT AGGGGCTTAC CACTTATCAG GTATCCAAAA CAGCCTACCT GCTATAACTG ATGACGAGCT CAAAAAGCTC CCCAAAGCTA CCTCTCAACT CACCCTGATG CCTTATTCCT ATTTGCGTCT CAGCAGTCGT ACGGGTTATG GAGCGGGCAA TACGGCTCCT TATTACTTTG AGCTGATGTG GCAAGCGATG CACGAAAACA CCCTCAATCA GCTCTCAGCT GTCTATCTTA CTAAAGTAGC CAAAATCTTG CGTAATCAAG GGCAAAATGC CTCTTCTGCT AGCGTAATTG AAGCGGTGCG TCTTGCTAAT GTGCTTTCGG CTATGAAAGG TGGTTCTTAC CCTGTGTTGC AAGACCTCCA CGATGCAGTA GTTACTTGTT TTGGTGGGGG AGACCTTGCT GTGGTAGCCG AAGCTATCAA TAAGGTAGAT ATCGGTACGG CTATTGGGGC ATTACCCGAA GGGGTGAGCC AGACGCCCGT ACAAGAGGAT ATGAACCAAG AGCTGAAACG CTTAAAGCTT ACCAACTACA AATCGGCGGT AGCGCAAGAC CTCACCCTCG ACCTGCGTGA GAACTTAAAA GTAAAAACCA AAGAAGCTGC TTTTATAGAC CTAAATCGCT CTACATTCCT CCATCGCTTG GAAGTGTTGG GCATTCACTT TGCCACTCAG CAGCACGTAC AGCAGGATAA AGCCTCGTGG GCAGAGAAAT GGGTGTTACA GTGGAGTCCT GAGGTCGAAA TAGAAATTGT AGAAGCTAAC CTTAAAGGTG AAACGCTTGA AATAGCCACA GCTTTTGTAC TCAAAGAACA GCTCAACGAA AGCACCGACC TTTCAGTAGT AGCTAAAATC ATTAGGCAGG CTTGCGAATG TCAGCTTACG CATATTTTTA GCAATGCGCT CAGCACCTTG CAACGCCTTT TGGTAGATAG TAATAGTTTT GCCGAAACTG CTTTTGCTGC ACACGAGCTC TCGGTACTTA TACAGTACGG TGATTTGCGT CAGTTCAATC TCGAACCGCT GAAACCTATC TTGCAACAGC TTTTCCTCCG TGCTTCGTTA TTACTGATAG ATGCTTCATC TTGTGATGAC AAAGCCTCTA AACAAATTGT AGAAGCTATC AATACTATGG AGTTCATAGC CGAACAGCAA TACGAATTGG TAGATACCGA AACGTGGCAA AAAGAACTTA CCCACCTTGC GTGGCGTGAC GATGTGAACA CCAAACTTTC GGGGGTAGCC TTTGCTATAT TGTTAGAGCA CAATTTAGCT ACTGAAGAAC AATGTGGAAA AGAAGTGTCA CGCCGTCTTT CAGCAGGTGT CCCCGCCGAT TTAGGAGCTT CGTGGTTTGA AGGCTTTTCA GGAAGAAATA GATACGCATT GTTATCGCGT ACGATTATAT GGCAAGAGTT AGACAACTAT GTACGCCAAT TAGATGAAGA ACAATTTATG CGCTCGGTAG TGTTCTTGCG CCGTGCTTTT TCTGATTTTG AGCCTAACCA AAAGAACAGT ATCGCCGAAC TTTTAGGAGA CCTTTGGGGT ACTGGTAAAG AAGCTACTGC CGAACTCTTG CAAGAAGTGC TTACGGAAGA AGAGAGTACT AAATTAGACG AACTCAACGA CTTTGATTTT GATTTTTAA
|
Protein sequence | MNNIHFFGVR HLSPSAAYHL IAFLEENNPK CILIEGPADA TPLISQIAQK GVKPPIAMLG YTTELPIETV LYPLASYSPE YQAICWGVKK KVTLRFIDLP SENMLKLKQE QRTEEEAEKA KEFYLYHNTL YKQIAEEGGE TDYEDYWERH FEHNLNPDAF APTLALQSGE MRQMVIDKEY ENAPFDFSYN LIREAYMKRE IAKACTEFKP EEIVVIVGAY HLSGIQNSLP AITDDELKKL PKATSQLTLM PYSYLRLSSR TGYGAGNTAP YYFELMWQAM HENTLNQLSA VYLTKVAKIL RNQGQNASSA SVIEAVRLAN VLSAMKGGSY PVLQDLHDAV VTCFGGGDLA VVAEAINKVD IGTAIGALPE GVSQTPVQED MNQELKRLKL TNYKSAVAQD LTLDLRENLK VKTKEAAFID LNRSTFLHRL EVLGIHFATQ QHVQQDKASW AEKWVLQWSP EVEIEIVEAN LKGETLEIAT AFVLKEQLNE STDLSVVAKI IRQACECQLT HIFSNALSTL QRLLVDSNSF AETAFAAHEL SVLIQYGDLR QFNLEPLKPI LQQLFLRASL LLIDASSCDD KASKQIVEAI NTMEFIAEQQ YELVDTETWQ KELTHLAWRD DVNTKLSGVA FAILLEHNLA TEEQCGKEVS RRLSAGVPAD LGASWFEGFS GRNRYALLSR TIIWQELDNY VRQLDEEQFM RSVVFLRRAF SDFEPNQKNS IAELLGDLWG TGKEATAELL QEVLTEEEST KLDELNDFDF DF
|
| |