Gene Coch_0301 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCoch_0301 
Symbol 
ID8366707 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCapnocytophaga ochracea DSM 7271 
KingdomBacteria 
Replicon accessionNC_013162 
Strand
Start bp382606 
End bp382926 
Gene Length321 bp 
Protein Length106 aa 
Translation table11 
GC content41% 
IMG OID644982722 
Productthioredoxin 
Protein accessionYP_003140425 
Protein GI256819146 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG3118] Thioredoxin domain-containing protein 
TIGRFAM ID[TIGR01068] thioredoxin 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCATTAG AAATAACAGA TGGAAATTTT GAAGACTTGG TGCTTAAAAG TACCCAGCCT 
GTATTAGTAG ACTTTTGGGC AGTGTGGTGT GGACCTTGCC GTATGCTCGC TCCCGTTGTA
GAAGAAATAT CTAAAGAATA CGAAGGTAGA GTAGTAGTAG GCAAAGTAGA TGTGGATAAC
AACCAAGAAT TTGCTGCTAA ATATGGCATT CGCAATATCC CTACCGTATT GGTATTCCAA
AATGGAGAGG TAGTAGGTCG CCAAGTGGGA GTAGCTCCTA AAAAGACTTA CACCGATGCA
TTAGACGGAT TATTGTCTTA A
 
Protein sequence
MALEITDGNF EDLVLKSTQP VLVDFWAVWC GPCRMLAPVV EEISKEYEGR VVVGKVDVDN 
NQEFAAKYGI RNIPTVLVFQ NGEVVGRQVG VAPKKTYTDA LDGLLS