Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Coch_0243 |
Symbol | |
ID | 8366648 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Capnocytophaga ochracea DSM 7271 |
Kingdom | Bacteria |
Replicon accession | NC_013162 |
Strand | - |
Start bp | 315686 |
End bp | 318187 |
Gene Length | 2502 bp |
Protein Length | 833 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 644982663 |
Product | heavy metal translocating P-type ATPase |
Protein accession | YP_003140367 |
Protein GI | 256819088 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG2217] Cation transport ATPase |
TIGRFAM ID | [TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC [TIGR01511] copper-(or silver)-translocating P-type ATPase [TIGR01525] heavy metal translocating P-type ATPase |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAATACA ATATAGAAGG TATGGGGTGC AGAGGTTGTG CCAATACCAT ACAAAAAAAG CTCTCTGAAG TAGCAGGCGT AACAGCTGTT ACCGTAGATT TCGCTACTAA AAAAGCTACT GTCGAAACTG ATAGAGAAAT CCCTTTTGAA GCTCTTGAAA AAGCCTTAGA GGGTACTCAT TATAGCATTC ATCAGGCTTC AAATTCTGAA GGCTCTGGTG TTTTCTATTG TCCTATGCAC TGCGAAGGCG ATAAAACCTA CGATCACCCT GGTGATTGCC CTATATGTGG TATGCACTTG GTAGAACAAG TAGGAGGAGC TCAACAACAA CATCATCACC ACGAAGAAAC CCCAAAAAAA GCCAAAGGCT CTGGTGTTTT CTATTGTCCT ATGCACTGCG AGGGCAACAA AACCTACGAC CACCCCGGTG ATTGCCCCGT ATGTGGTATG GATTTAGTAG AGCAAGTAAG CACAGAGGCT CCTGAAGGTG AAAGTGCGGA AGAGCAAAAG CGCAAAAAGT TACGCCGTCA CTTTTGGGGT GCTGTAGCCT TTACGCTCCC TATCTTTATC ATCGCAATGA TCGGAATGTG GCACAACAAT CCGCTGTATG AGTTAATGCC CGTAAGTGCT TGGAACTGGG TGCAGTTTGC GCTTTCTTTA CCAGTAGTTT TCTATTTCTG CTGGATATTC TTCGAAAGGG CTTGGCGCAG TATCCGCACC TTGCACTTCA ATATGTTTAC CCTTATAGGG ATAGGCGCTG GTGTAGCTTG GCTTTTCAGT GTAGTAGGAC TGTTAGTTCC TGATATGTTC CCTGAACAAT TCAAAGAACA CGGCTCAGTA CACTTGTATT TCGAAGCTGC TACCGTCATT CTCACTTTGG TACTCTTAGG GCAAGTGCTC GAAGCCGATG CCCACAGTCG TACGCAAGGG GCTATCAAAA AACTGTTGAA TTTAGCCCCT AATGAGGCTA CTAAAATTGT TCACGGCGAG GAAATAAGAG TCTCTATAGA AGAAGTAACC TTAGGCGATT TGTTGCGAGT GAAACCTGGT GAGAAAATCC CCGTTGATGG TGTAATTACC GAAGGTAGTG CGAGCATAGA TGAGAGTATG ATTACGGGCG AACCTATTCC TGCTGAAAAA GAAGTAGGCA GTAAAGTGTC GGCAGGTACG CTCAACGGTG CTCAATCATT TGTGATGAAA GCGGAAAAGG TAGGTAGCGA TACCCTGCTC TCTCAAATCG TACAGTTGGT ACAACAAGCC AGCAGTAGCC GTCCTCCCAT TCAAAATTTA GCCGACAAGA TAGCCTCTTA CTTTGTGCCT ATTGTGATAG GGATTTCAGT GCTTACCTTT GTGATATGGT CGGTTTTTGG AGGTGAAAAT GCTTACGTAT ACGCCCTGCT CAATGCCGTA GCAGTATTGA TTATCGCTTG TCCTTGTGCA CTCGGTTTAG CCACCCCTAT GTCGGTAATG GTAGGCGTAG GCAAAGGAGC TCAAAACGGT ATCTTGATAC GCAATGCTGA AGCCTTAGAA GTGATGAACA AAGTAAACAC ATTAGTCATC GACAAAACAG GCACACTTAC TGAGGGGAAA CCCAGTGTGA GCGAAGTATT TACCTTTGGC AACAGAAGTG AAAAGGATTT GTTACAAGTG CTCTATAGTC TCAATCAGCA CAGTGAACAC CCTTTAGCAA AAGCTACCAA TGCATACACT CAAGCACAAG GTGCTACTCC CCTATCCTTT ACTAACTTTG AAGCCTTGGC GGGCAGAGGG GTAAAAGCCT CTTACGAAGG AAAAAATTTT TTCTTTGGCA ATGAACGATT GATGGAAGAA ATCGGTGCTC CTTTATCCGA AGAAATACAA ACTGTGGTAA AAACAGCGCA AGCAGCAGGA AAAACCGTTT CACTTCTCGC CATAGAAAAA GAAATCATTG GGGTAGTAAC CATCACCGAT AGAGTAAAAA CCTCTACTGT TCAAGCCTTA CAAGAGTTGC AGGACTTGGG AGTAGAAATT GTAATGCTTA CAGGCGATAA TTCGCTTACA GCTGCAGCTA TTGCCAAAGA AATAGGCATC AGCAACTACA AAGCTGGTAT GCTCCCTCAA AACAAACAAG CTGAAGTAGC GCGTTTGCAA GCTGAAGGAA AAATCGTAGC AATGGCAGGC GATGGTATCA ACGATGCTCC TGCTTTGGCA CAAGCTAACG TAGGCATCGC AATGGGCACC GGTACTGATA TCGCTATAGA AAGTGCTGAA ATCACCTTAG TAAAAGGCGA TTTAAATGGT ATTGTAAAAG CTAAAAAACT CAGCAAAGCA GTAATGAAAA ACATACACGA AAACCTATTT TTTGCTTTGG TATACAACGT TGTAGGTATC CCCGTTGCTG CAGGAGTGCT ATACCCTATT TTTGGTATCT TGCTTTCTCC TATGTTGGGT GCCTTAGCAA TGAGCTTTAG CTCTGTAAGT GTTATAAGTA ATGCTTTAAG ATTGAGAAGA ACGAAATTAT AA
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Protein sequence | MEYNIEGMGC RGCANTIQKK LSEVAGVTAV TVDFATKKAT VETDREIPFE ALEKALEGTH YSIHQASNSE GSGVFYCPMH CEGDKTYDHP GDCPICGMHL VEQVGGAQQQ HHHHEETPKK AKGSGVFYCP MHCEGNKTYD HPGDCPVCGM DLVEQVSTEA PEGESAEEQK RKKLRRHFWG AVAFTLPIFI IAMIGMWHNN PLYELMPVSA WNWVQFALSL PVVFYFCWIF FERAWRSIRT LHFNMFTLIG IGAGVAWLFS VVGLLVPDMF PEQFKEHGSV HLYFEAATVI LTLVLLGQVL EADAHSRTQG AIKKLLNLAP NEATKIVHGE EIRVSIEEVT LGDLLRVKPG EKIPVDGVIT EGSASIDESM ITGEPIPAEK EVGSKVSAGT LNGAQSFVMK AEKVGSDTLL SQIVQLVQQA SSSRPPIQNL ADKIASYFVP IVIGISVLTF VIWSVFGGEN AYVYALLNAV AVLIIACPCA LGLATPMSVM VGVGKGAQNG ILIRNAEALE VMNKVNTLVI DKTGTLTEGK PSVSEVFTFG NRSEKDLLQV LYSLNQHSEH PLAKATNAYT QAQGATPLSF TNFEALAGRG VKASYEGKNF FFGNERLMEE IGAPLSEEIQ TVVKTAQAAG KTVSLLAIEK EIIGVVTITD RVKTSTVQAL QELQDLGVEI VMLTGDNSLT AAAIAKEIGI SNYKAGMLPQ NKQAEVARLQ AEGKIVAMAG DGINDAPALA QANVGIAMGT GTDIAIESAE ITLVKGDLNG IVKAKKLSKA VMKNIHENLF FALVYNVVGI PVAAGVLYPI FGILLSPMLG ALAMSFSSVS VISNALRLRR TKL
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