| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Coch_0241 |
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| Symbol | sdhA |
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| ID | 8366646 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Capnocytophaga ochracea DSM 7271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013162 |
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| Strand | - |
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| Start bp | 312785 |
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| End bp | 314824 |
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| Gene Length | 2040 bp |
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| Protein Length | 679 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 644982661 |
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| Product | succinate dehydrogenase flavoprotein subunit |
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| Protein accession | YP_003140365 |
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| Protein GI | 256819086 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit |
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| TIGRFAM ID | [TIGR01811] succinate dehydrogenase or fumarate reductase, flavoprotein subunit, Bacillus subtilis subgroup |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.588419 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTTAATT TTATGAGTAC ATTAGATTCT AAAATTCCTG AAGGTCCTAT AGCGGACAAA
TGGACGAAAT ATAAAGACCA TATCAACCTC GTAAACCCTG CTAACAAGCG TAATATCGAT
GTGATTGTGG TAGGTACTGG CTTGGCAGGA GGTTCGGCTG CAGCTACCCT CGCTGAATTA
GGCTACAACG TAAAAGCATT CGCTTACCAA GATTCTCCTC GCCGCGCGCA CTCTATCGCT
GCTCAGGGGG GTATCAATGC CGCTAAAAAC TATATGGGCG ATGGCGACTC TAACTATCGC
TTGTTCTACG ATACTGTAAA AGGGGGCGAC TACCGCGCTC GTGAGGCTAA CGTATATCGC
CTTGCTGAGG TATCTGGCAA TATCATCGAC CAATGTGTGG CGCAAGGCGT ACCTTTCGCT
CGTGATTATG GTGGGCTACT TGATAACCGC TCTTTCGGTG GGGTATTGGT TTCTCGTACT
TTCTATGCCA AAGGTCAAAC AGGACAACAG CTTTTGCTCG GTTGCTATGC CGCAATGAAC
CGCCAAATTG CTCGTGGTAA AATAGATATG TACAACCGCC ACGAAATGCT CGATGTGGTA
ATAGTAGACG GCAAAGCTCG TGGTATCATC GCTCGTAACC TTGTTACTGG TGAAATTGAA
CGCCACTCTG CTCACGCGGT GGTTATCGCT TCTGGTGGTT ATGGTAACGT ATACTTCCTT
TCAACCAATG CGATGGGCTC TAACGCTACC GCAGCTTGGA AAATCCACAA AAAAGGTGCT
TACTTTGCTA ACCCTTGCTT CACTCAAATC CACCCTACTT GTATCCCTCG TTCAGGTGAC
TATCAGTCTA AATTGACTTT GATGTCTGAA TCTTTGCGTA ACGACGGACG TATTTGGGTG
CCTAAGAAAA TGGAAGATGC TGTAGCGATA CGCGAAAAAC GCAAAAAACC TACTGAAATC
CCTGAAGAAG ACCGCGATTA CTACTTGGAA CGCCGTTATC CTGCTTTCGG TAACCTCGTG
CCTCGTGACG TAGCTTCACG TGCTGCTAAA GAACGTTGCG ATGCAGGCTA TGGAGTAAAC
GAAACAGGTG AAGCTGTTTA TTTGGATTTC TCTTCTGCTA TCGAACGTTA CGGTAAAGAA
CAATGTAAAA TTCACGGCGT AGAACCTACT AAAGAAGAAG TTACCAAGCG TGGTGAAAAA
ATCGTAGAAG CTAAATACGG TAACCTTTTT CAAATGTACG AAAAGATTGT AGCCGAAAAC
CCTTATAAAA CTCCAATGAT GATTTATCCT GCTACTCACT ACACTATGGG TGGTATTTGG
GTAGATTACA ACTTGATGAC CACTATACCT GGTTGTTATG CTATCGGTGA GGCAAACTTC
TCCGACCACG GGGCAAACCG CTTAGGAGCT TCTGCCTTGA TGCAAGGTTT AGCTGATGGT
TACTTTGTAT TACCTTACAC TATTGGCGAT TACTTATCCG CTGATATCCG TACCGGTAAA
ATCCCTACTG ATACCCCTGA GTTTGACGAA GCAGAACGCA TCGTAAAAGA ACGTTTGGCT
TACTTCATCA ACAATAAGGG TACCCACTCT GTAGATTACT TCCACAAAAA ACTTGGTAAA
GTGATGTGGG ATAAAGTAGG TATGGCGCGT AATGCTGAAG GCTTGAAAGA AGCTATCAAA
GAAATACGCG AAATACGCGA AGATTTCTGG AAAAACGTAA AAGTACCTGG TGAACTCACT
GGTATGAACG TAGAGCTTGA AAAAGCAGGT CGTGTAGCCG ACTTCCTTGA ACTTGGTGAG
TTATTTGCTA AAGACGCTTT AGAACGTAAT GAGTCTTGTG GTGGTCACTT CCGCGAAGAA
TATCAAACTC CTGATGGTGA AGCTCTCCGC GACGACAAAA ACTATGCTTA TGTAGCCGCT
TGGCAATACA CTGGTAATCC TAAAGAAGTA GTGAATACCT ACAACCCTAG TGAAGAGGTA
ATGCATAAAG AACCTCTTGT ATTTAAAGAT ATTGAACTTA AACAACGTAG TTATAAATAG
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| Protein sequence | MLNFMSTLDS KIPEGPIADK WTKYKDHINL VNPANKRNID VIVVGTGLAG GSAAATLAEL
GYNVKAFAYQ DSPRRAHSIA AQGGINAAKN YMGDGDSNYR LFYDTVKGGD YRAREANVYR
LAEVSGNIID QCVAQGVPFA RDYGGLLDNR SFGGVLVSRT FYAKGQTGQQ LLLGCYAAMN
RQIARGKIDM YNRHEMLDVV IVDGKARGII ARNLVTGEIE RHSAHAVVIA SGGYGNVYFL
STNAMGSNAT AAWKIHKKGA YFANPCFTQI HPTCIPRSGD YQSKLTLMSE SLRNDGRIWV
PKKMEDAVAI REKRKKPTEI PEEDRDYYLE RRYPAFGNLV PRDVASRAAK ERCDAGYGVN
ETGEAVYLDF SSAIERYGKE QCKIHGVEPT KEEVTKRGEK IVEAKYGNLF QMYEKIVAEN
PYKTPMMIYP ATHYTMGGIW VDYNLMTTIP GCYAIGEANF SDHGANRLGA SALMQGLADG
YFVLPYTIGD YLSADIRTGK IPTDTPEFDE AERIVKERLA YFINNKGTHS VDYFHKKLGK
VMWDKVGMAR NAEGLKEAIK EIREIREDFW KNVKVPGELT GMNVELEKAG RVADFLELGE
LFAKDALERN ESCGGHFREE YQTPDGEALR DDKNYAYVAA WQYTGNPKEV VNTYNPSEEV
MHKEPLVFKD IELKQRSYK
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