Gene Coch_0239 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCoch_0239 
Symbol 
ID8366644 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCapnocytophaga ochracea DSM 7271 
KingdomBacteria 
Replicon accessionNC_013162 
Strand+ 
Start bp311346 
End bp311948 
Gene Length603 bp 
Protein Length200 aa 
Translation table11 
GC content42% 
IMG OID644982659 
Producthypothetical protein 
Protein accessionYP_003140363 
Protein GI256819084 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTTCAG AAAAAGCCTT TAAAATATTT GAAGAAAGTA TCGCGCAATA CCACATTGCG 
GACGATGTAT ATCAGCCTTT TGTAAACCCT TATCCATCAA CTGACTTGCT CAATCACTTG 
CTTTATCGCA AGAATTGGAT TGACACCGTG CAATGGCATT ATGAGGATAT TATTCGCGAC 
CCGAACATCG ACCCAGTGGT AGCCCTCGAC CTCAAACGCA AAATCGATGC TTCTAACCAG 
GATCGTACCG ATATGGTAGA GTATATAGAT AGCTACTTTT TAGACTTGTA TAAGGAGGTG 
AAACCACTTC CTGAGGCTAC TATCAACACC GAGAGTCCTG CGTGGGCAGT GGATAGGCTT 
TCAATTTTAG CACTGAAAAT CTATCATATG CAGGAAGAAG TAAACCGCCC CGATGCCACT 
CCTGAGCATC GTGCTAAATG CCAAGAAAAA CTCAATGTAC TGCTCGAACA GAAAAAAGAT 
CTTTCAACGG CTCTCAACCA ACTTTTAGAC GATATCGCTG CCGGTCGCAA GTATATGAAA 
GTCTATAAAC AAATGAAGAT GTACAATGAT GAGGAGTTGA ACCCCGTTTT GAGAAAAAAA 
TAA
 
Protein sequence
MFSEKAFKIF EESIAQYHIA DDVYQPFVNP YPSTDLLNHL LYRKNWIDTV QWHYEDIIRD 
PNIDPVVALD LKRKIDASNQ DRTDMVEYID SYFLDLYKEV KPLPEATINT ESPAWAVDRL 
SILALKIYHM QEEVNRPDAT PEHRAKCQEK LNVLLEQKKD LSTALNQLLD DIAAGRKYMK 
VYKQMKMYND EELNPVLRKK