Gene Coch_0225 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCoch_0225 
Symbol 
ID8366630 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCapnocytophaga ochracea DSM 7271 
KingdomBacteria 
Replicon accessionNC_013162 
Strand
Start bp295296 
End bp296660 
Gene Length1365 bp 
Protein Length454 aa 
Translation table11 
GC content42% 
IMG OID644982645 
Producthypothetical protein 
Protein accessionYP_003140349 
Protein GI256819070 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAACAA TAGTACACAA ACTCGCCCTC AGTGTAGTAG CTTTGCTCGG CTTACTCAGC 
TGTGACGAAA AGCACGAAGG CGAACTTATT AACGACAAAG AGGCAAAAAT TAATGTCTTT
CAAGCCGATG GTATCGATGG GATTATAGAC GAGGAGAAAC AAACTATCAC GGTGTATGCT
CCTTGGAATA CCGATCTTAC CAAAATGACC ACTTCCCTCT CATTGCCCGA GGGAGCTACC
TCAGTGCCTA CTGCAGGAAC GAATGTCGAT TTGAGCAAAG GTGCCAAATA CCGCATTTTT
AATGGTAACC TCTATTGGGA TTACACTGTT ACCGCTCAAT ATCCACAGTT AGAGAATTTT
GCTATTGGCA AATACAAAGC TACGATTGAC CACAGTACGG GTAAGATAAG CGTGAAATAC
CCTAAGGGTG AAAGCCTTAC TGCGCTTACC CCCACCTTCA GCACAACACC TAATGCTACT
GTGAGCCCTG CTTCGGGAGT TACCCAAAAC TTTACCCAAA GCGTTACTTA TACTATGAGT
TATCGTGGGA AAAACTTTGT GTATAGCGTA GAGATTATCC CTACTAACTT TGCACCTATT
GCCTTTGTAG GTACAGCTAA CAGTGCTTCT GCTATAGCTG ATGAAGACGA GAAAGCGGCT
TACACTTGGC TTACCGAAAA TTACGACACT GCTAAATACA TTTCGTTTAG CGACATCAAG
GACGGCAAAG TTAATCTCAA CGACTACAAA GTGATTTGGT GGCATTGGGA TAACAACAAA
GAGTTGCCAG CTGAAGCCAA AGCAGATGCT GTTGTGAATA AGATGAAACA ATTCTATGCT
GCTGGTGGCT CGTTCTTATT GTCTTCTTGG GCAGTACAAT ACGTAGTCGA TTTAGGTATC
GCCTTAGACG GCAAGGTAGT AAACAATATG TGGGGTGAAA ATAACGTTCC ATTTACAGTA
GGTGAAGATT GGTCACTTTG CTACAAAGGC AATGAAAACC ACCCATTGTT TAAAGGATTG
ACTAAAAAGT CGGGGGTTGA TTATATATCC TTCTTTCTTT CTAAAGGAAC AAATACAAAA
GGACATAATG CTATTTGGAA CTTCGATTGG GGAGATTATG AACATAATGC TGCAGGTTGG
CAAACTGCTG CAGGCTCTAA AATATTAGCG AGTTTGCATT GGGACGTAAC GATGAGCAAT
CGCGCTGTCA TCTTTGAATA CCTCAAACGA GGCAATGCAG GTCGCACTAT CTGTATAGGT
AGTGAAGCTT ACGACTGGTA TAACGAAAAC AATTCACCTG CCAATGCTTA TAAGGGCAAT
ATCGAATTGC TCACTGCCAA CGCCTTAGAA TATTTAGCGA ATTAA
 
Protein sequence
MKTIVHKLAL SVVALLGLLS CDEKHEGELI NDKEAKINVF QADGIDGIID EEKQTITVYA 
PWNTDLTKMT TSLSLPEGAT SVPTAGTNVD LSKGAKYRIF NGNLYWDYTV TAQYPQLENF
AIGKYKATID HSTGKISVKY PKGESLTALT PTFSTTPNAT VSPASGVTQN FTQSVTYTMS
YRGKNFVYSV EIIPTNFAPI AFVGTANSAS AIADEDEKAA YTWLTENYDT AKYISFSDIK
DGKVNLNDYK VIWWHWDNNK ELPAEAKADA VVNKMKQFYA AGGSFLLSSW AVQYVVDLGI
ALDGKVVNNM WGENNVPFTV GEDWSLCYKG NENHPLFKGL TKKSGVDYIS FFLSKGTNTK
GHNAIWNFDW GDYEHNAAGW QTAAGSKILA SLHWDVTMSN RAVIFEYLKR GNAGRTICIG
SEAYDWYNEN NSPANAYKGN IELLTANALE YLAN