Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Coch_0177 |
Symbol | |
ID | 8366579 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Capnocytophaga ochracea DSM 7271 |
Kingdom | Bacteria |
Replicon accession | NC_013162 |
Strand | - |
Start bp | 213474 |
End bp | 214130 |
Gene Length | 657 bp |
Protein Length | 218 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 644982594 |
Product | hypothetical protein |
Protein accession | YP_003140301 |
Protein GI | 256819022 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.00582655 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTGAAAT CTATTAAAAA CTTTGTTTTT ATGTCTATCT TAGCTTTAAC TTACCTTCTA CTTAGGTTCG TTCATCTTTT GTCTTTTCTT CGTTCATTGT TCATTTGCCC GTGCGGCTCG CACCGTCATT TGTTCGTCAT TTGTTCGTTC ATTGTTCGTC TTTTGTTCGT CTTTTGTTCG TTCATTGTTC GTCTTTTGTT CGTCTTTTGT TCGTCTTTTG TTCGTCTTTT GTTCGTCTTT TGTTCGTCTT TTGTTCGTCT TTTGTTCGTC TTTTGTTCGT CTTTTGTTCG TTCATTGTTC GTCTTTTGTT CGTCTTTTGT TCGTCTTTTG TTCGTCTTTT GTTCGTCTTT TGTTCGTCTT TTGTTCGTCT TTTGTTCGTC TTTTGTTCGT CTTTTGTTCG TCTTTTGTTC GTCTTTTGTT CGTCTTTTGT TCGTCTTTTG TTCGTCTTTT GTTCGTCTTT TGTTCGTCTT TTGTTCGTCT TTTGTTCGTC TTTTGTTCGT CTTTTGTTTA TCTGCCCGTG CGGTTCGCAC CGTCTTTTAT TTGGTTACTC TTTGTTTAGT TACCTATCGT ACTACGACCT CGCATCATCA TCGATTTAGT ATTATTGGCT TTATTGACAT TTTTGATATT ATTACTTTTT TTTCACTACT TTACTGA
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Protein sequence | MLKSIKNFVF MSILALTYLL LRFVHLLSFL RSLFICPCGS HRHLFVICSF IVRLLFVFCS FIVRLLFVFC SSFVRLLFVF CSSFVRLLFV FCSSFVRSLF VFCSSFVRLL FVFCSSFVRL LFVFCSSFVR LLFVFCSSFV RLLFVFCSSF VRLLFVFCSS FVRLLFVFCL SARAVRTVFY LVTLCLVTYR TTTSHHHRFS IIGFIDIFDI ITFFSLLY
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