Gene Coch_0144 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCoch_0144 
Symbol 
ID8366546 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCapnocytophaga ochracea DSM 7271 
KingdomBacteria 
Replicon accessionNC_013162 
Strand
Start bp167611 
End bp168669 
Gene Length1059 bp 
Protein Length352 aa 
Translation table11 
GC content44% 
IMG OID644982563 
ProductFAD-dependent pyridine nucleotide-disulphide oxidoreductase 
Protein accessionYP_003140270 
Protein GI256818991 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0492] Thioredoxin reductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGAAA CGGATATCAT CATTATAGGG GCGGGACCTA CGGGATTGTT TGCTGTGTTT 
GAGGCAGGAT TGCTTAGGTT AAAATGTCAT TTGATAGATA CGCTCCCTCA GGTGGGCGGT
CAGCTTACTG AGTTGTATCC CAAGAAGCCT ATTTTTGATA TACCAGGATA CCCGAGTGTA
GGGGCTTCGG AATTAGTGGA TAATTTAATG GAGCAAATCA AGCAGTTTCA GCCTGAATTT
ACGCTTGGTG AAACAGCGAT GACTCTTACT AAAAATGATG ATGATACTTT TGTGGTTACT
ACTGATAAAG GCACCCAAAT AAAAGGGAAA GCTGTAGCTA TTGCAGGAGG ATTAGGTACT
TTTGAACCTC GCAAGCCTGA ACTGCCGAAC CTTGAACAAT ACGAAGATAG GGGAGTGGCT
TACTTTGTGA AACACCCCGA GAGTTACGCA GGCAAACACG TGGTGATAGC CGGAGGAGGC
GACTCTGCAC TCGATTGGAG TATTTACTTA GCCGAGAAAG TAGCAACGGC TTCGGTTACC
TTAGTGCACC GACGTAATGA GTTTCGCGGG GCATTGGATT CGGTTGAAAA AGTGAGAGCC
CTCAAAGAGG CGGGGAAAAT CAACTTAAAA ACGCCTTATG AGGTAGTGGG ACTAGGTGGA
GAAAAGCATT TGGAGTCGGT AGTATTGGAG CAGGAAGGGG GCGAAAGAGA AACTCTTGTA
GCTGATGCTT TTATACCTTT GTTTGGACTT ACTCCTAAAT TAGGACCTAT TGCTACGTGG
GGTGTGGAGA TTGAAAGAAA TGCTGTGAAG GTGAACAATG CCTTAGACTA TCAAACTTGT
ATAGAGGGAG TATACGCCAT AGGCGACGTG AATACTTACC CAGGAAAACT GAAACTAATA
CTTTGTGGCT TTCACGAAGC GACCTTAATG TGCCAAAGTG TGTACAACCG CATTTACCCT
AATAAGAAAT ATGTGTTAAA ATATACTACG GTAGTGGGTA TAGACGGTTT TGATGGGTCT
CGCAAAGAGG CTGAAAAGGC AGTGGTGAAA GCGATTTAG
 
Protein sequence
MKETDIIIIG AGPTGLFAVF EAGLLRLKCH LIDTLPQVGG QLTELYPKKP IFDIPGYPSV 
GASELVDNLM EQIKQFQPEF TLGETAMTLT KNDDDTFVVT TDKGTQIKGK AVAIAGGLGT
FEPRKPELPN LEQYEDRGVA YFVKHPESYA GKHVVIAGGG DSALDWSIYL AEKVATASVT
LVHRRNEFRG ALDSVEKVRA LKEAGKINLK TPYEVVGLGG EKHLESVVLE QEGGERETLV
ADAFIPLFGL TPKLGPIATW GVEIERNAVK VNNALDYQTC IEGVYAIGDV NTYPGKLKLI
LCGFHEATLM CQSVYNRIYP NKKYVLKYTT VVGIDGFDGS RKEAEKAVVK AI