| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Coch_0130 |
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| Symbol | |
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| ID | 8366532 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Capnocytophaga ochracea DSM 7271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013162 |
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| Strand | - |
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| Start bp | 150996 |
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| End bp | 152801 |
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| Gene Length | 1806 bp |
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| Protein Length | 601 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 644982549 |
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| Product | GTP-binding protein TypA |
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| Protein accession | YP_003140256 |
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| Protein GI | 256818977 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG1217] Predicted membrane GTPase involved in stress response |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR01394] GTP-binding protein TypA/BipA |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00979759 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCGCTA TTAGAAATAT AGCTATTATT GCCCACGTAG ACCACGGCAA AACTACCTTA
GTAGACAAGA TTTTACACCA CTGCGCTCTC TTCCGCGAAA ATCAAGATTC AGGCGAACTG
ATATTAGATA ATAACGACCT CGAACGCGAA CGAGGAATTA CTATCCTCTC TAAAAACGTT
TCAGTAGTTT ATAAAGACAT CAAAATAAAC ATTATCGATA CACCTGGCCA CGCCGACTTT
GGTGGGGAGG TTGAGCGTGT ACTCAATATG GCTGATGGCG TGCTCTTGCT TGTTGATGCT
TTTGAAGGTC CTATGCCTCA AACACGTTTT GTACTCCAAA AGGCTATAGA AATGAAGTTG
AAACCCATTG TGGTAATCAA CAAAGTTGAT AAAGAAAACT GTACTCCTGA TGAGGTACAC
GAAGCTGTAT TCGACCTGAT GTTTGAGCTC GGTGCTGAAG ATTGGCAACT CGATTTTCCT
ACGGTATATG GTTCAGCTAA ACAAAATTGG ATGTCAGAAG ATTGGCATAA GAAAACTGAT
AGTATTGCAC CCCTACTCGA TATGGTGGTA AAGTATATTC CAGCTCCTCA AATAGAAGAA
GGTAGCTTGC AAATGCTTAT TACTTCATTG GATTATTCTA GTTTTACTGG ACGTATTGCT
ATTGGTCGTT TGCACCGTGG TATCCTAAAA TCGGGTATGA ATATTTCATT AGTAAAACGC
GACGGAACTA TTGTAAAATC TAAAATTAAA GAGCTACACC TCTTTGATGG TTTAGGTCGT
AAGAAAGTAG AAGAAGTACA AGCAGGCGAC ATTTGTGCGA TTGCAGGTTT AGAAGGCTTT
GAAATTGGTG ATACTATCGC CGATTACGAA AACCCCGAAG CACTTCCTAC TATTGCTATC
GATGAACCTA CTATGAGTAT GCTTTTTACT ATTAATGATT CTCCTTTCTT TGGTAAAGAT
GGTAAGTTTG TAACCTCTCG CCATATCAAA GAACGTTTAG AGCGTGAATT AGAAAAAAAC
CTTGCTTTAC GCGTAGAACC TACTGATAGT GCCGATAAGT TTATCGTTTA TGGTCGTGGG
GTATTGCACC TTTCAGTACT CATTGAAACA ATGCGTCGTG AAGGTTATGA ATTGCAAATT
GGTCAGCCAC AAGTTATCAT CAAAGAGATT GACGGCGTAA AATGCGAACC TATAGAAGAA
CTTACTATTG ATTTACCTGA GAATGTAAGT GGTAAAGCAG TCGATTTAGT TACCCTTCGC
AAAGGCGAAA TGCTAAGTAT GGAACCTAAA GGTGAACGTA TGATTATTAA GTTTATCATT
CCTTCTCGCG GTATCATTGG TTTGCGTAAC CAATTGCTTA CGGCTACTGC TGGTGAAGCT
ATTATTCACC ACCGTTTTTT GGAGTTCCAA CCTTTCAAAG GTGAAATAGC AGGGCGTATT
AATGGTTCGC TTATTTCTAT GGAACAAGGT ACTGCTATAC CTTATTCTCT CGACAAATTG
CAAGACCGAG GCAAATTCTT CATCTTTCCT GGTGAAGATA TTTATACAGG ACAAGTAATC
GGTGAAAACT CTCGTAGTGG AGATATCGTA GTAAATGTAA CGAAGACTAA AAAACTTACT
AACGTACGTG CTGCGGGCTC TGATGAAAAA GTAAAATTAG CACCGCCTAT TAAGTTTTCT
TTAGAAGAAG CCTTGGAATA TATCCAAAAA GATGAGTATG TAGAAGTAAC TCCTAAAAAT
ATGCGTTTAC GCAAAATCTA CTTAGATGAG AATGAACGCA AACGCCACGA AAAGGAGTTT
AAGTAA
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| Protein sequence | MTAIRNIAII AHVDHGKTTL VDKILHHCAL FRENQDSGEL ILDNNDLERE RGITILSKNV
SVVYKDIKIN IIDTPGHADF GGEVERVLNM ADGVLLLVDA FEGPMPQTRF VLQKAIEMKL
KPIVVINKVD KENCTPDEVH EAVFDLMFEL GAEDWQLDFP TVYGSAKQNW MSEDWHKKTD
SIAPLLDMVV KYIPAPQIEE GSLQMLITSL DYSSFTGRIA IGRLHRGILK SGMNISLVKR
DGTIVKSKIK ELHLFDGLGR KKVEEVQAGD ICAIAGLEGF EIGDTIADYE NPEALPTIAI
DEPTMSMLFT INDSPFFGKD GKFVTSRHIK ERLERELEKN LALRVEPTDS ADKFIVYGRG
VLHLSVLIET MRREGYELQI GQPQVIIKEI DGVKCEPIEE LTIDLPENVS GKAVDLVTLR
KGEMLSMEPK GERMIIKFII PSRGIIGLRN QLLTATAGEA IIHHRFLEFQ PFKGEIAGRI
NGSLISMEQG TAIPYSLDKL QDRGKFFIFP GEDIYTGQVI GENSRSGDIV VNVTKTKKLT
NVRAAGSDEK VKLAPPIKFS LEEALEYIQK DEYVEVTPKN MRLRKIYLDE NERKRHEKEF
K
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