Gene Coch_0108 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCoch_0108 
Symbol 
ID8366510 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCapnocytophaga ochracea DSM 7271 
KingdomBacteria 
Replicon accessionNC_013162 
Strand
Start bp128412 
End bp129680 
Gene Length1269 bp 
Protein Length422 aa 
Translation table11 
GC content41% 
IMG OID644982527 
Productpeptidase M16 domain protein 
Protein accessionYP_003140234 
Protein GI256818955 
COG category[R] General function prediction only 
COG ID[COG0612] Predicted Zn-dependent peptidases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTCAAT CTCTCATTTT TGAAGAATAC GACCTCTCTA ATGGACTACA CGTGATTCTT 
CACCGAGATA ACTCAGCTCC TGTGGTTACC ATAGGAGTAA TGTATCACGT AGGTGCCAAA
GACGAAGACC CTACCCGCAC TGGCTTTTCC CACTTCTTTG AGCATCTCCT TTTTGAAGGC
ACTCAGCATA TAGCACGTGG CAAATGGTTT GATATTGTAT CGGCAAATGG CGGACATAAC
AATGCTTTCA CTACGCAGGA TAAAACTTAT TATTATGAAG TCTTCCCGTC TAACAATTTG
CAATTAGGCT TGTGGATGGA ATCCGAACGT ATGTTGCACC CTGTTATTAA TGAGATTGGA
GTAAGGACTC AAAATTCAGT GGTAAAAGAA GAGAAAAACC AACGTATAGA CAATACACCT
TACGGCAGGA TAATGTACCG CTCGGCTATC AATCCGTACC TTTTTAAAAA ACACCCTTAT
TCGGGAACAG TAATTGGAAA AGTGGAACAT TTAGACGCTG CAAGCTTAGA GGAGTTTATC
GCATTTAAGA AGAAGTTCTA CAACCCTAAC AACGCTGTAC TGGTGGTGGC AGGCGATTTC
GATACGGTAC CGACCAAAGA ATGGATAGAA CAATACTTTG CGACCATTCC TAATACGGGT
GATGCTATAC AGCGTATCAA AATAGAAGAA GCTCCTATCA CTGAAACTAT TGAGGTAACC
GAATACGACC CTAATATACA AATCCCACTG AAACTATATG CCTATCGCAC TCCTGCAATG
ACGAACAAAG ATTCGTTTAC TATCGACTTG CTTTCTAACA TTCTCACCGA CGGAAAGAGT
GCTCGCCTCT ACAAAAAGAT GATAGACGAG CATCAAACAG CTTTGCAGGT ATTGGCTTTT
TCGGACGCTC AAGAAGATTA TGGCGTTTAT ATAATGGGAG CACTCCCTAT GGACGGTGTG
AGTTTGGAAA CTTTGGCACA AGAAATGGAC GAAGAAATTA CAAGACTACA AACCGAACTC
ATCAGTGAGC GAGAATATGA AAAGTTACAA AACCAGATAG AGGCTAACTT TGTGTCTCAA
AATAGCCATA TGGAAGGAAT TGCCCTCTCT TTGGCAGACA ACTATACTTT CTACAAAGAC
ACTAACCTTA TTAACAAGGC TATAGACCAC TATCGCGCTA TTACCCGAGA GGATATCAGA
GAGGCTGCAC GCAAGTATTT GGACAAAAAC CAACGTTTAG ACCTCAATTA TTTACCTTCA
AATCTATAA
 
Protein sequence
MAQSLIFEEY DLSNGLHVIL HRDNSAPVVT IGVMYHVGAK DEDPTRTGFS HFFEHLLFEG 
TQHIARGKWF DIVSANGGHN NAFTTQDKTY YYEVFPSNNL QLGLWMESER MLHPVINEIG
VRTQNSVVKE EKNQRIDNTP YGRIMYRSAI NPYLFKKHPY SGTVIGKVEH LDAASLEEFI
AFKKKFYNPN NAVLVVAGDF DTVPTKEWIE QYFATIPNTG DAIQRIKIEE APITETIEVT
EYDPNIQIPL KLYAYRTPAM TNKDSFTIDL LSNILTDGKS ARLYKKMIDE HQTALQVLAF
SDAQEDYGVY IMGALPMDGV SLETLAQEMD EEITRLQTEL ISEREYEKLQ NQIEANFVSQ
NSHMEGIALS LADNYTFYKD TNLINKAIDH YRAITREDIR EAARKYLDKN QRLDLNYLPS
NL