| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Coch_0100 |
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| Symbol | tpiA |
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| ID | 8366502 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Capnocytophaga ochracea DSM 7271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013162 |
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| Strand | + |
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| Start bp | 121122 |
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| End bp | 121871 |
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| Gene Length | 750 bp |
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| Protein Length | 249 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 644982519 |
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| Product | triosephosphate isomerase |
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| Protein accession | YP_003140226 |
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| Protein GI | 256818947 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0149] Triosephosphate isomerase |
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| TIGRFAM ID | [TIGR00419] triosephosphate isomerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGAAAAA AAATTGTAGC AGGGAACTGG AAAATGAACA ACGACCTTAA CAAGTCGTTA
GCACTTATTT CCGACCTATT GAAAAAAGTA CCTCAAACAA ATGCTGAGGT AATGATTGCC
CCTACCTTTG TAAACCTTAT TCCAGCTGTA GAAGCAGTAA AAGGTAGCCA CATCGAAGTA
ATTGCGCAAA ATATGCACTT TGCTGAAAAC GGTGCTTACA CGGGAGAGAT TTCGGCTGAA
ATGTTAGGCA GTATTGGGGT AAAAACTACT ATTTTAGGAC ACTCTGAGCG CCGCGCTTAC
TTTAACGAAA CTGATGAGAG TTTAGCTAAA AAAGTGAACA CAGCCCTTAA ACACAATATG
CGTGTAGTGT TCTGTATTGG TGAAGAGTTA GCTGACCGCA AAGCTAATAA GCACTTTGAT
GTGGTAGGTA GCCAAATCAA AAATGGTTTG TTCCACTTGC CTGCTGAGGC TTGGCAACAT
ATTGTATTGG CTTACGAACC TGTATGGGCT ATTGGTACAG GCGAAACCGC TACTCCTGAC
CAAGCACAAG AAATTCACCA CTTTATTCGT AAAACTATTG CTGACAAATA CGGCAAAGGG
GTTGCTGATA AAGTATCTAT CTTGTATGGA GGTAGTGTAA AACCGGATAA TGCAAAAGAA
ATCTTTGCAA AAGAAGATGT AGATGGCGGA CTCATAGGTG GGGCTGCCCT TAAAGCTGAT
GATTTTGTTA CTATTATCAA AAGCATTTAA
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| Protein sequence | MRKKIVAGNW KMNNDLNKSL ALISDLLKKV PQTNAEVMIA PTFVNLIPAV EAVKGSHIEV
IAQNMHFAEN GAYTGEISAE MLGSIGVKTT ILGHSERRAY FNETDESLAK KVNTALKHNM
RVVFCIGEEL ADRKANKHFD VVGSQIKNGL FHLPAEAWQH IVLAYEPVWA IGTGETATPD
QAQEIHHFIR KTIADKYGKG VADKVSILYG GSVKPDNAKE IFAKEDVDGG LIGGAALKAD
DFVTIIKSI
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