Gene Coch_0083 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCoch_0083 
Symbol 
ID8366485 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCapnocytophaga ochracea DSM 7271 
KingdomBacteria 
Replicon accessionNC_013162 
Strand
Start bp104878 
End bp105777 
Gene Length900 bp 
Protein Length299 aa 
Translation table11 
GC content37% 
IMG OID644982502 
Producthypothetical protein 
Protein accessionYP_003140209 
Protein GI256818930 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAGAA TAATTCTTTC CCTATTAGTT ACTGCTTGCT TGACTGCGTG TAGTAAAAAT 
GACAACGAGG CTCCTGACGA CAAGAAGCCT CCCGTTACTT TAGAACCTAA GCCAGCTCCT
GAACCTACTG TGGGGGTATA TCCTCGCATT GTAACTACTA CCCAGCATTT AAGAAAAAAG
CAATTGGTTG CTGAGTCTAC TATTGTCAAT GGTAAGGTTA CTAAATCTAT TCAGAAAGTA
ACTGATTTAG AAAACGGAAA TGTTACTACT TATATCATTG ATTACAAGTA CGATGCTAAT
GGTTACCCTA CCGAAATCAC CACCTCACGT AAGGGGCGCA CTATACTCGA TGAGAAAGAA
ACTTACCGCT TTGAAAATAA AAGATTGGTA GAAAAGATTA AAATTGTAGA AGGGGGCGTT
AGAACGAATA CTCATAACTA TTCTTACGAC TCTGAAGGTA AGCTCATAAA GTATATTTAC
TCTTCGCTAC AATACACAGA TTCTAAACCA AGTGTTAGAG AAACAAACTA CACTTATACA
GGCACTACTG TTTCAGCTGC TATTGTAGGC GGACATACTG AAACAATTAC TTTCGACAGC
CATTGGAATA AGTTGAAAAG TGAACAAAAA TTCACTCGAA CTGCCGAAAT TTGGGAGTAT
CAATACAACG ATAAACCCAA TCAAGCTTAT GGTCATTTAG GCGACTTGCT CTACCCCGAA
GAGTTTATCT CTAAAAATTG TCTTACCTTA ATGAGACACA TTTCAAAAGA AGAAGGCAAA
GAGGATTCTA TTAGCGAATA TCGCAGGGAA TACCAATACA ATGCACAGGG TAATATAAGA
GAAATTAAAA AATACGACTC TAACGGTAAG TTAGAAGAAA CCACAGAATA CGAATATTAG
 
Protein sequence
MKRIILSLLV TACLTACSKN DNEAPDDKKP PVTLEPKPAP EPTVGVYPRI VTTTQHLRKK 
QLVAESTIVN GKVTKSIQKV TDLENGNVTT YIIDYKYDAN GYPTEITTSR KGRTILDEKE
TYRFENKRLV EKIKIVEGGV RTNTHNYSYD SEGKLIKYIY SSLQYTDSKP SVRETNYTYT
GTTVSAAIVG GHTETITFDS HWNKLKSEQK FTRTAEIWEY QYNDKPNQAY GHLGDLLYPE
EFISKNCLTL MRHISKEEGK EDSISEYRRE YQYNAQGNIR EIKKYDSNGK LEETTEYEY