| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Coch_0070 |
|---|
| Symbol | |
|---|
| ID | 8366472 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Capnocytophaga ochracea DSM 7271 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013162 |
|---|
| Strand | + |
|---|
| Start bp | 92298 |
|---|
| End bp | 93638 |
|---|
| Gene Length | 1341 bp |
|---|
| Protein Length | 446 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 644982489 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003140196 |
|---|
| Protein GI | 256818917 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGTATCCC CCTTCTCTCT TGCCTTATTA TTGAGATTGA AAATTGTTAA TGGATATGCA
AATGTAGTAA AATTTTATAA TATGAAACAC TTATTTTTAG TTTTTTTTAT CGTACAGTCT
GCTTTCGCTC AAAATAGTAC CGTTTTCGAT TGCTCCCGAA GCCTTAGAAT CGACTTTAAT
CTATTAGCCA ATGCCCAGCG TATAGAGGTA ATTTTTCAAC AGCTCAAAAG TGAACCTCAT
TGGGGAGGCT CGCACACTCA CTTTGTTTTT CCGAACTTAG GAAACCTGCG CCTTCAACTA
TTCGACGGCG AAACTCTTGT CTTCTCAAAA GGCTTCAACT CCCTCGCCGA TGAGTGGATG
GAAATTGAAG AAGCCAAGAC TGAAAAACGA CTCTTTTATC ACGCTATGCA AATTCCTTTT
CCTAAAAAGA AACTGTCTCT GCACATCGAT AAACGAAACC GCGAAGGCGT TTTCGAAACG
ATTGCTTCTC GTGAGATTGA CCCTAACGAC TATTTTATAA AAGAAGAAAA GACCGTTGCC
TTCCCTGTGA AGAAAATACT GTATAATGGT GAGGCTTCCA AAAAAGTAGA TATAGCCATC
TTAGCAGAAG GATACACCCA AGCCGAAACC GAGAAATTCT ATGCCGATGC GCAACGTATG
ACCGACTATA TGTTCACCAT TTCCCCTTTC GATAAACTCA AAAACAATTT CAATGTATAT
GCCATAGCCG TACCTTCTCA AGAAAGTGGC ACCGATGTAC CTGGAAAAAA CATTTTTAAA
AACACTGCAT TTAACTCTTC CTTCTACACT TTCAATCAAG AACGCTACCT CACCACCAAC
AGTATTTGTG AAATAGCCGA TGCTGCCTCA GTAGTCCCTT ACGACCAACT CTATATCTTA
GTAAATACTG AAACTTATGG TGGCGGTGGT TTCTACAATC ACCTAAATTT AGGCACTGCT
GATAACGACC TTTCTGAAAA GGTATACATA CACGAGTTCG GACACGGTTT TGTAGGTCTC
GCCGATGAAT ATTACTACGA TTGGGATCCC ACTTTTCAAG AGATGTACAA TACTAAAATT
GAACCTTGGG AAGAAAACAT TACCTCATTG GTGAATTTTG AGAGCAAATG GAAGGATATG
GTAAAAAAGA AGACTCCTAT CCCTACTCCT CGCACTCCTA AATATAAAGA TGTTGTAGGT
GCTTTCGAAG GAGGAGGTTA CACCAGTAAA GGCATTTACA GTCCTGCACA AGACTGTCGT
ATGAAATCTA ACGAACCAAA AGGCTTCTGC CCCGTGTGTG AACGTGCTAT TCGCAAAATA
GTAGACTTTT ACACAAAATA A
|
|---|
| Protein sequence | MVSPFSLALL LRLKIVNGYA NVVKFYNMKH LFLVFFIVQS AFAQNSTVFD CSRSLRIDFN
LLANAQRIEV IFQQLKSEPH WGGSHTHFVF PNLGNLRLQL FDGETLVFSK GFNSLADEWM
EIEEAKTEKR LFYHAMQIPF PKKKLSLHID KRNREGVFET IASREIDPND YFIKEEKTVA
FPVKKILYNG EASKKVDIAI LAEGYTQAET EKFYADAQRM TDYMFTISPF DKLKNNFNVY
AIAVPSQESG TDVPGKNIFK NTAFNSSFYT FNQERYLTTN SICEIADAAS VVPYDQLYIL
VNTETYGGGG FYNHLNLGTA DNDLSEKVYI HEFGHGFVGL ADEYYYDWDP TFQEMYNTKI
EPWEENITSL VNFESKWKDM VKKKTPIPTP RTPKYKDVVG AFEGGGYTSK GIYSPAQDCR
MKSNEPKGFC PVCERAIRKI VDFYTK
|
|---|
| |