Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Coch_0069 |
Symbol | |
ID | 8366471 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Capnocytophaga ochracea DSM 7271 |
Kingdom | Bacteria |
Replicon accession | NC_013162 |
Strand | - |
Start bp | 91031 |
End bp | 92068 |
Gene Length | 1038 bp |
Protein Length | 345 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 644982488 |
Product | glycosyl transferase family 9 |
Protein accession | YP_003140195 |
Protein GI | 256818916 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0859] ADP-heptose:LPS heptosyltransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.960845 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAACATT TAGCTATTTT TAGAATGTCG GCGATGGGAG ATGTAGCCAT TAGTGTGCCG GTTGTAACAG CTTTTTCGGA GCAATATCCC GATGTAAAAA TCACTTACCT CACGCGACCG TTATTTGCAC CGATGTTTTC ACATATTCCT AACTTGGAAG TATTCACTCC TGAAATTAAT GGAAAACACA GTGGTTTATC GGGGCTGTAC AAACTGTATA AGGAATTGAT GGCGAAGGGA ATTGACGGTG TGGCAGACAT TCACAATGTG TTGCGCACTA ATGTACTGAA ATTCTATTTT AAGGGTAGCA AAATACCTTT CAAGCAAATA GACAAAGGAC GTAGAGAAAA GAGAGCACTT ACCAGCTATA AGTGTAAAGT TTTTGAGCCT TTAAAGCCTT CGTATGAGCG GTATGCTGAT GTGTTTGCTT CTTTGGGTTT CCCGATTGAC CTAAGTGAAC CATATATTTT ACCGCCAGAA GAACCGAGTG AAACGGTACA GAAATTACTG TGTGAAGGAG TGCATATAGG GGTTGCTCCG TTTGCGTCGT ACATAGGTAA ACAGTATCCA TTTGAAAAGA TGTGCGAGGT GATAACGGCA CTTTCTCAAC GGTATGACAG TGGCAAGATT TACATCTTTG GAGGAGGAAA AGAAGAGGAA GAGCAGGTGA GCAAAATAAA CTTACCTAAT GCTGAAAATA TGGTAGGGAA GCTCTCGTTT AAACAAGAGT TGGAGCTCAT TTCGCACTTA GATATAATGA TAGCAATGGA CAGTGGGAAT GCGCACCTAT CGGCGATGTA TGGAATTCCG ACGCTTACCT TATGGGGAGT GACGCACCCT TATGCGGGGT TTTATCCTTA TTTGCAGCCT AAGGAGAATG CTCTTTTGGC AGATAGAGAG CGGTATCCAC TCATTCCTAC TTCGGTATAT GGGAAGAAAT ACCCAAAAGG TTATGAGAAA GCCATAGAGA CTATTACGAT TGAAGAGATT ATGGCGAAGA CAGAAGCTAT ACTAAGTGAC TTAACAGAAG AGAAATAA
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Protein sequence | MEHLAIFRMS AMGDVAISVP VVTAFSEQYP DVKITYLTRP LFAPMFSHIP NLEVFTPEIN GKHSGLSGLY KLYKELMAKG IDGVADIHNV LRTNVLKFYF KGSKIPFKQI DKGRREKRAL TSYKCKVFEP LKPSYERYAD VFASLGFPID LSEPYILPPE EPSETVQKLL CEGVHIGVAP FASYIGKQYP FEKMCEVITA LSQRYDSGKI YIFGGGKEEE EQVSKINLPN AENMVGKLSF KQELELISHL DIMIAMDSGN AHLSAMYGIP TLTLWGVTHP YAGFYPYLQP KENALLADRE RYPLIPTSVY GKKYPKGYEK AIETITIEEI MAKTEAILSD LTEEK
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