Gene Coch_0041 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCoch_0041 
Symbol 
ID8366443 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCapnocytophaga ochracea DSM 7271 
KingdomBacteria 
Replicon accessionNC_013162 
Strand- 
Start bp57046 
End bp57570 
Gene Length525 bp 
Protein Length174 aa 
Translation table11 
GC content35% 
IMG OID644982461 
Productprotein of unknown function DUF1706 
Protein accessionYP_003140168 
Protein GI256818889 
COG category[S] Function unknown 
COG ID[COG4283] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCACGTC CGCAATCTAA ATTAGGGCTT GTAGTATCAG CAGAAAGAAA TTACGATGAA 
TTGATTTCTT TGATTGATAC TATTCCCGAA GACAAACGAG AAAAGGAATT TCCTAAGGGG 
ACAATGAATC GAAATCTCCG AGATGTACTT GGGCATTTAT ATCATTGGCA TTTGCTTTTT 
TTATCTTGGT ATGAGGAAGG AATGAAAGGG GGTAAACCCA AAATACCCAA AGAGGGTTAC 
ACTATGAAAG ACACTCCTAA ATTAAACCAA GAGATATGGA AGAGTTGCCA AAATGTACCG 
TTTTCTGAAA TGTTTTCTCT GTTTAAAGAT TCACATAGTA AAGTTTTTCA TATTATAGAA 
AGCCATACTG ATGAGGAACT TTTTACAAAG AAAAGATATC CTTGGACGAA GACCACTTCG 
TTAGGCTCTT ATTTAGTTTC GGCAACGTCA GGTCATTACG ATTGGGCTTT AAAACTAATT 
CGCAAATCAA TAAAAAAGAA TAATTACTTA TCATCAAGAA AATGA
 
Protein sequence
MARPQSKLGL VVSAERNYDE LISLIDTIPE DKREKEFPKG TMNRNLRDVL GHLYHWHLLF 
LSWYEEGMKG GKPKIPKEGY TMKDTPKLNQ EIWKSCQNVP FSEMFSLFKD SHSKVFHIIE 
SHTDEELFTK KRYPWTKTTS LGSYLVSATS GHYDWALKLI RKSIKKNNYL SSRK