| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Coch_0028 |
|---|
| Symbol | |
|---|
| ID | 8366428 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Capnocytophaga ochracea DSM 7271 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013162 |
|---|
| Strand | - |
|---|
| Start bp | 32588 |
|---|
| End bp | 33031 |
|---|
| Gene Length | 444 bp |
|---|
| Protein Length | 147 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 644982446 |
|---|
| Product | conserved hypothetical membrane spanning protein |
|---|
| Protein accession | YP_003140155 |
|---|
| Protein GI | 256818876 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.0903727 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATATATC TTGTTGTATA TTTTATTTGT TGGTTGCTGG CTGTTGTACT GTATACTTTT
TCATTCGATG AAAGCTTTGT ATATACCGCA TTATACACTC ATTTGGTTTA TGGAGTAGGC
TTTTTTGGCT TGTTTAACTT TGTAGGGCAC TCGGTACTCA GTGAGAAAGT AGCTAAAACC
ATAGGATGGG TATCTAATGG TTTTCAAAAA GAATTGGGGT TTGTGTCGTT GGGGATAGGC
ATTTGTGGTA TATTGTGCCA TTGGTTTCGC GACGGATTCT GGTTGGCAAC GGCTATTCCG
TTTAGTGTAT TCTTGATAGG AGCAGCCTTG TTGCACATCG CTGAGATGAA GCGAAAACAC
AATTTCAACA AAGGGAACGT ATGGATTATA CTTCCTGATT TGCTAATGCC CCTAACGTTA
TTAATATTGT TTATACTGAA TTAG
|
|---|
| Protein sequence | MIYLVVYFIC WLLAVVLYTF SFDESFVYTA LYTHLVYGVG FFGLFNFVGH SVLSEKVAKT
IGWVSNGFQK ELGFVSLGIG ICGILCHWFR DGFWLATAIP FSVFLIGAAL LHIAEMKRKH
NFNKGNVWII LPDLLMPLTL LILFILN
|
|---|
| |