Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cmaq_1994 |
Symbol | |
ID | 5708995 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Caldivirga maquilingensis IC-167 |
Kingdom | Archaea |
Replicon accession | NC_009954 |
Strand | + |
Start bp | 2070686 |
End bp | 2071633 |
Gene Length | 948 bp |
Protein Length | 315 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 641276504 |
Product | NAD-dependent epimerase/dehydratase |
Protein accession | YP_001541800 |
Protein GI | 159042548 |
COG category | [G] Carbohydrate transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.744815 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 42 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTTAAGT TCCTGGTACT GGGCCTAGGA TTCATAGCAA CACACGTTGC AGAGGGGTTA TCTAAAATCG GGCAGGTTAC TGTAACATAT AGGTCACTGA ATGGTGTTAA TGAGGTTTAT GCAAAGGTAC TAAGGGGTAG TGTTGAATTA ACTAGGCTTA ATCCACTTAC TGATGAGGAT GAGTTAAGGG GTTTAATTAA GAATTCCGAC ACAGTGATTA ACCTAATTGG TGCATTGGGT AATGATGCCC AGCTCCTTAG GACAGTTCAC GTAGTTATTC CTAGGCAGGT CGCCTCATTA ATAGCTGAGT ACTCACCCTC AACAATGCTG GTGCATGTTA GCGCATCCAA TGTTATGGGG CCTATTGGTA AATTCATTAA TGAGGAGCCT AAGCACTGTG AGGGGGCTAG GCCATCAACA CCCTATGAGG AGACGAAGTG CCTTGGCGAA CAGGTGGTTT ACTCAATGTC CCAATCCGCT GGTTTCCCAC TAGCCATAAT TAGACCAACC CTAGTTTACG GTAAGTATAA TGCTCACCCT CAATTCCTTC AAATATACAA CATGGCTAAG AGGGGTATTG TACCTAGGAT TAACGTTAAA TTAATGGCCA TCAGCGCCGT TAAGCTCACT GAGTTGATTG CTAGGCTGCA TGAATTGAGG CCAAGGGGCC TTTACCTATA CGCCACTGAG TGTGAACCAG TTGAGGTGAC TAGGTTCTTT GAGGTTATGG TTAAGGCACT TGGGAGGAGG CCATTGAGGA TACCGGTACC TAATGCCTTA TTGAAGTTAG CATTACCAAG TGATATTAAG CCACTGTTCA AGTACGTTAA TGTGGTTTAC AGTTGCTTGA AGGCTAAGGA AATTGTGGGT GACTTAGGAT TCATGGAGAG TGAGGTTTAT GAGAATGCAT TATTCATTAA ACAGTATGAG GATTACATTA CTGTGTAA
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Protein sequence | MVKFLVLGLG FIATHVAEGL SKIGQVTVTY RSLNGVNEVY AKVLRGSVEL TRLNPLTDED ELRGLIKNSD TVINLIGALG NDAQLLRTVH VVIPRQVASL IAEYSPSTML VHVSASNVMG PIGKFINEEP KHCEGARPST PYEETKCLGE QVVYSMSQSA GFPLAIIRPT LVYGKYNAHP QFLQIYNMAK RGIVPRINVK LMAISAVKLT ELIARLHELR PRGLYLYATE CEPVEVTRFF EVMVKALGRR PLRIPVPNAL LKLALPSDIK PLFKYVNVVY SCLKAKEIVG DLGFMESEVY ENALFIKQYE DYITV
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