Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cmaq_1969 |
Symbol | |
ID | 5708443 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Caldivirga maquilingensis IC-167 |
Kingdom | Archaea |
Replicon accession | NC_009954 |
Strand | + |
Start bp | 2045713 |
End bp | 2046378 |
Gene Length | 666 bp |
Protein Length | 221 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 641276479 |
Product | hypothetical protein |
Protein accession | YP_001541775 |
Protein GI | 159042523 |
COG category | [R] General function prediction only |
COG ID | [COG1634] Uncharacterized Rossmann fold enzyme |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 0.628894 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGTGCAC TGGGAATGAG GAGGAGCATA GTACTGGATC CCCTTGAATC ACACCTCTCT AGGTTAGTTT ACATGAGGGT TATGAGCGGC TTAGGCCTAA ACTTCAGTAA TGACGCAAAG GCAGCTGAAC TAGCCAGCCA CTACTGCAGC GGTGACCCGG ATCAATTATG GTCCTTAAAC TGGGAAACAG TGACAATCTA CATGCCGCCT TATGCCGGTG AACCTAATCC ACGTGGATTA ATTATAGCTG TTGAGGGTTA TACACTACGT AGGCTACTTA ATGATGGTGT CGTCCCCGAC ATAGTTGTCA CCGACTTTGA TTATGAACCA GATAGCCTAA TTGGGTTTAA GGGCATTGTT ATTGGTCACG CCCATGGTGA CAACGTGAAT GCGTATGTTA AGTATGCTAG GCACGTAAGT AGGCTAATAC CAAGTGTCCA GGTTTGGCCA GTGGACTGCT CAATCCTAGT ACCAGGCTTC ACTGATGGTG ATAGGGCGGT TTACCTAGCC GCCTACATGG GTTCACGGCG AATTACAGTA AGGGGGTTTA ACCCCGATGC ACCAATTAAG AGGAGTGATG AGGTTAAGAG GATGAAGCTT AAGTTAGCTG AATACTTCAT TAATAGGGCA AGTAGGTTAA CTAATATTAG TATTAGTAAG TATTAG
|
Protein sequence | MSALGMRRSI VLDPLESHLS RLVYMRVMSG LGLNFSNDAK AAELASHYCS GDPDQLWSLN WETVTIYMPP YAGEPNPRGL IIAVEGYTLR RLLNDGVVPD IVVTDFDYEP DSLIGFKGIV IGHAHGDNVN AYVKYARHVS RLIPSVQVWP VDCSILVPGF TDGDRAVYLA AYMGSRRITV RGFNPDAPIK RSDEVKRMKL KLAEYFINRA SRLTNISISK Y
|
| |