Gene Cmaq_1967 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCmaq_1967 
Symbol 
ID5708441 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaldivirga maquilingensis IC-167 
KingdomArchaea 
Replicon accessionNC_009954 
Strand
Start bp2043081 
End bp2044064 
Gene Length984 bp 
Protein Length327 aa 
Translation table11 
GC content46% 
IMG OID641276477 
Productbifunctional phosphoglucose/phosphomannose isomerase 
Protein accessionYP_001541773 
Protein GI159042521 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0166] Glucose-6-phosphate isomerase 
TIGRFAM ID[TIGR02128] bifunctional phosphoglucose/phosphomannose isomerase 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value0.68214 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGTATG GCTACGAGGA ATGGCCTAAA TTATCCCTGG AGTCCTTTAA ACTGGGTAGG 
GAATTGAATC TAAGGTCAAT TAAGGTTGGA TCCATTAACT ATGACTTCGA GCCAAGTAAC
ATAGTGATCA CTGGGATGGG TGGGTCAGGT ATAGTTGGTG ATATTGTTAG GGATTCCCTA
TGGGGCCACA ATATTATTAT TCACAAGGAC TTTAACATAC CTAAGTGGGT TGACTCAAGG
TCACTCGTAG TAGCTGTAAG CTACTCAGGG GAGACACTTG AGACGATTTG CGGTGCACTG
GATGCATTAA GAAGGGGGGT ACCTGTGGTG GGTGTTACCA CTGGTGGTAG GTTAGCCTCA
GAGCTTGAGG GTAGGGGTGC ACCGGTGGTT AAGGTTCCTA AAGCCATAGC CCCCAGGTTC
GGGTTACCTA ACCTACTGTA CGCGGTGCTT GGTTTATTAA GCCACTACTT AACCATTCCT
GAAATTGATG AGAGCATTAG TGTTCAGGGT GATGCGTTGA GGAGTGAGTT ACCAGGTAGG
TTAGCCTCCT TCCTGAAGGG CTACGTCCCC ATGATCTTCG CACCCATTGG GCTGCAGGCG
GTGGCGTATA GGTTTAAGAA TGACCTCAAT GAAAACTCCA AGACACCTGC AGTGGTAGCC
ATTGTGCCTG AGGCTGATCA CAATGATATA GTTGCAGTCA TGCTTAAGCA CCCTGTTAAG
TACATTATAA TAAGGGGGAG GACTGATGAC GTTCACGACT ACTTAATGAG GGCTGTGGAG
GAGGTTGTTA AGAATTACTC CAGTGATGTT GAGGTTGTTG AATTAAAGGG TTCAAGTAGA
CTCAGCCAGG AGGTTTACGG TTCAATGCTC CTCGGCCTAG TTAGCGTTAA GTTGGCTGAA
TTATACGGTA TTGACCCGGT TAGGACTGAT CCAATAAACA CCCTTAAGGA GAAGATAAGG
GGCATTAATT GTCCATCAAA TTAA
 
Protein sequence
MPYGYEEWPK LSLESFKLGR ELNLRSIKVG SINYDFEPSN IVITGMGGSG IVGDIVRDSL 
WGHNIIIHKD FNIPKWVDSR SLVVAVSYSG ETLETICGAL DALRRGVPVV GVTTGGRLAS
ELEGRGAPVV KVPKAIAPRF GLPNLLYAVL GLLSHYLTIP EIDESISVQG DALRSELPGR
LASFLKGYVP MIFAPIGLQA VAYRFKNDLN ENSKTPAVVA IVPEADHNDI VAVMLKHPVK
YIIIRGRTDD VHDYLMRAVE EVVKNYSSDV EVVELKGSSR LSQEVYGSML LGLVSVKLAE
LYGIDPVRTD PINTLKEKIR GINCPSN