Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cmaq_1954 |
Symbol | |
ID | 5708972 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Caldivirga maquilingensis IC-167 |
Kingdom | Archaea |
Replicon accession | NC_009954 |
Strand | - |
Start bp | 2031564 |
End bp | 2031923 |
Gene Length | 360 bp |
Protein Length | 119 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 641276463 |
Product | ribosomal protein L21e |
Protein accession | YP_001541760 |
Protein GI | 159042508 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG2139] Ribosomal protein L21E |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 41 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTTGCTA GGACGCATGG CTATAGGTTC AAGTCGAGGA AACTGCTCTC AAAGACCCCT AGGGAGAAGG GTAGGCCTGG ATTATTTAAG TGGCTTCTCG CAAGGTATTA TAGGGTTGGT GATAAGTTGG CTATAGACAT TGACCCAGTC TACGTAAGTA CGGCACCGCA TAAGAGGTAT CAGGGTAGGG TTGGAACATT AATTGGCTGG AGGGGGAGGG CCCTTGTACT GGAGGTTAAC TTCATGGGTG AGAGGAGAAT TATAATAACA ACACCTGAGC ATGTTAAGCC ACTTAACCTT GAGGAGTTCC TTAAGGAGAG GGTGTTGGGT AAACCCATTA TTCAAAGTGA GGCTAATTAA
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Protein sequence | MVARTHGYRF KSRKLLSKTP REKGRPGLFK WLLARYYRVG DKLAIDIDPV YVSTAPHKRY QGRVGTLIGW RGRALVLEVN FMGERRIIIT TPEHVKPLNL EEFLKERVLG KPIIQSEAN
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