Gene Cmaq_1954 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCmaq_1954 
Symbol 
ID5708972 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaldivirga maquilingensis IC-167 
KingdomArchaea 
Replicon accessionNC_009954 
Strand
Start bp2031564 
End bp2031923 
Gene Length360 bp 
Protein Length119 aa 
Translation table11 
GC content46% 
IMG OID641276463 
Productribosomal protein L21e 
Protein accessionYP_001541760 
Protein GI159042508 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG2139] Ribosomal protein L21E 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTTGCTA GGACGCATGG CTATAGGTTC AAGTCGAGGA AACTGCTCTC AAAGACCCCT 
AGGGAGAAGG GTAGGCCTGG ATTATTTAAG TGGCTTCTCG CAAGGTATTA TAGGGTTGGT
GATAAGTTGG CTATAGACAT TGACCCAGTC TACGTAAGTA CGGCACCGCA TAAGAGGTAT
CAGGGTAGGG TTGGAACATT AATTGGCTGG AGGGGGAGGG CCCTTGTACT GGAGGTTAAC
TTCATGGGTG AGAGGAGAAT TATAATAACA ACACCTGAGC ATGTTAAGCC ACTTAACCTT
GAGGAGTTCC TTAAGGAGAG GGTGTTGGGT AAACCCATTA TTCAAAGTGA GGCTAATTAA
 
Protein sequence
MVARTHGYRF KSRKLLSKTP REKGRPGLFK WLLARYYRVG DKLAIDIDPV YVSTAPHKRY 
QGRVGTLIGW RGRALVLEVN FMGERRIIIT TPEHVKPLNL EEFLKERVLG KPIIQSEAN