Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cmaq_1935 |
Symbol | |
ID | 5709786 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Caldivirga maquilingensis IC-167 |
Kingdom | Archaea |
Replicon accession | NC_009954 |
Strand | - |
Start bp | 2009572 |
End bp | 2010348 |
Gene Length | 777 bp |
Protein Length | 258 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 641276443 |
Product | hypothetical protein |
Protein accession | YP_001541742 |
Protein GI | 159042490 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR03095] rusticyanin |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.187916 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 48 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTTTAATC CCAGGCCTGG TGTAAGTAGG ACCGTGGTTT ACATTATACT TGTGGCTGTT GTAGCCGTGA TAGTTGGCCT AATACCCATG CTTTACCTCT ACATGCCCCA TAAGTCAACT GCAGTAACAG TATCCAGTAG CACATCAACA ACCACAGTAA CCACTACTAC GAGTACTACT ACTTTAACAA CTTCAACAAC CACTGTTACC TCAACGAGCA CAACAACCTC CACTGTTTCA CTTAATCCTT ACGTTCAATT CTTTCAATCA ACCCCAGTGG GGCCTGTGAC GTTAAGCCCG AGTCAAGTTA CTCAACTGGA GTCCTACATG CCGCCTAATG TTAAGGTTAT ATCATCTAAT AACACTATAG TGTTTAACTC AACAACAGTC TACATACTGG TTCTGGCTGG TCCATCAAGC AACTACCTCT CATTCCAGGT ATTCAACCTA ACTAACCCAA CCATAGTGGT TCCCAAGGGT GCTACAGTTA AGATAACTGT ACTTGATGTT AGTGTCCTGC CGCATAGCTT TGGCTTAGTA TCCAAGGGGC CACCCTACTC AGCATCCATA ACACCTGACC AGTATCCACC ACCATTCCCA GGGTCACAGA TGCCTCAATC AATACTTGTT AATGGCTTAA CACCAGCATC CTCAAGTAGT ATTAGTGGTT ACGTTATTGA GTTTAATGCC ACAACACCAG GCGTGTACTG GTACATTTGC TTCGTGCCGG GTCACGCTGC CTCAGGAATG TACGGTAAGT TCATTGTGCT TGGATAA
|
Protein sequence | MFNPRPGVSR TVVYIILVAV VAVIVGLIPM LYLYMPHKST AVTVSSSTST TTVTTTTSTT TLTTSTTTVT STSTTTSTVS LNPYVQFFQS TPVGPVTLSP SQVTQLESYM PPNVKVISSN NTIVFNSTTV YILVLAGPSS NYLSFQVFNL TNPTIVVPKG ATVKITVLDV SVLPHSFGLV SKGPPYSASI TPDQYPPPFP GSQMPQSILV NGLTPASSSS ISGYVIEFNA TTPGVYWYIC FVPGHAASGM YGKFIVLG
|
| |