Gene Cmaq_1927 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCmaq_1927 
Symbol 
ID5708851 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaldivirga maquilingensis IC-167 
KingdomArchaea 
Replicon accessionNC_009954 
Strand
Start bp2002733 
End bp2003197 
Gene Length465 bp 
Protein Length154 aa 
Translation table11 
GC content50% 
IMG OID641276435 
ProductPEBP family protein 
Protein accessionYP_001541734 
Protein GI159042482 
COG category[R] General function prediction only 
COG ID[COG1881] Phospholipid-binding protein 
TIGRFAM ID[TIGR00481] Raf kinase inhibitor-like protein, YbhB/YbcL family 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones51 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGGATTG AGAGCCCAGC CTTTAGGAAC GAGGACACTA TCCCGGTTAA ATACACGTGT 
GATGGGGATG ATGTTTCACC AGCCTTAAGG TGGTTCGACC CCCCACCCAA CGTGAAGGGC
TTCGTGTTAA TAATGGAGGA CCCTGATGCA CCCATGGGAA CCTTCACCCA CTGGATACTT
TACAATATTC CACCAAGCCT AAGTGAACTC CCTGAGAATA TCCCCAAGAG ACCTGAGGTT
CAGGGTATAG GTATGCAGGG TGTTAATGAC TTCGGTAGAA TTGGTTACGG TGGACCATGC
CCACCTAAAA CCCACCCACC CCACAGGTAT TACTTTAGGC TCTACGCCTT AGACTCAATG
CTTAACCTTA AGCCAGGTGC AGGCCTCAGT GAGGTTAAGA GGGCTATGAA TGGTCACGTT
ATTGCTGAGG CCTACGTAAT GGGTAGGTAC GGTAGGAGGA GGTAA
 
Protein sequence
MRIESPAFRN EDTIPVKYTC DGDDVSPALR WFDPPPNVKG FVLIMEDPDA PMGTFTHWIL 
YNIPPSLSEL PENIPKRPEV QGIGMQGVND FGRIGYGGPC PPKTHPPHRY YFRLYALDSM
LNLKPGAGLS EVKRAMNGHV IAEAYVMGRY GRRR