Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cmaq_1915 |
Symbol | |
ID | 5709297 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Caldivirga maquilingensis IC-167 |
Kingdom | Archaea |
Replicon accession | NC_009954 |
Strand | - |
Start bp | 1991984 |
End bp | 1992688 |
Gene Length | 705 bp |
Protein Length | 234 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 641276423 |
Product | hypothetical protein |
Protein accession | YP_001541722 |
Protein GI | 159042470 |
COG category | [S] Function unknown |
COG ID | [COG1738] Uncharacterized conserved protein |
TIGRFAM ID | [TIGR00697] conserved hypothetical integral membrane protein |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 57 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTACCCTG TACTATACTT CCTACTTGAG GCAGCCGTGG TGTATGTGTT GGTGGCTGTG ATAATGTACG TGTCATGGAG AATGGGGGGT GATGATGTGT TATTGGCTTC AGCAATATCA TCATACCTAA TGCTCCTAAC CGTTAGTCAG TTCCTAGCCA GTAAAATAAT GTACATTGGC TACGCCAACC TACCCAGCGG CACAGTAACC TACTCAGCCA CTGTGGCCAC ATTAGATGTA TTAACCCTTA AATTCGGTAG GAGAACCGGT TACTGGGTTG TTAGGATTGC TGCACTGCTT CAACTCGGGC TTTGGGCAAT CATTCAACTA GCAATATACG CCCCACCAGC CCCCTTCTGG AGCATGCAGA ACGCCTTCGC AAGTATTGTT GGTGAATCAG CTAGAATAGC CGTAGCTAGT GTTACAGCGT TCTTCACCGC TGAATCCCTT GACGTTCATC TGGTGAGTAG GATTATGGGT AATGTGTTCA AGAGGGTTGG TGTATCAGAC CCAATCAGTA TGACTGTGGA TAGTTTAGTC TTTGTACCGA TAGCCTTCTA CGGTGTAATG CCGTTACCAG CATTATTAAG CACCATGCTA GGCTTAATAC TGGGTAAATT AACCCTAGTA CCCTTAACCA TAGGCGCCGT GGCCGCTAAT AGAAGTGCAT TAAAGTACGC CCCGGTGATT CAAGTCCGTA AGTAA
|
Protein sequence | MYPVLYFLLE AAVVYVLVAV IMYVSWRMGG DDVLLASAIS SYLMLLTVSQ FLASKIMYIG YANLPSGTVT YSATVATLDV LTLKFGRRTG YWVVRIAALL QLGLWAIIQL AIYAPPAPFW SMQNAFASIV GESARIAVAS VTAFFTAESL DVHLVSRIMG NVFKRVGVSD PISMTVDSLV FVPIAFYGVM PLPALLSTML GLILGKLTLV PLTIGAVAAN RSALKYAPVI QVRK
|
| |