Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cmaq_1901 |
Symbol | |
ID | 5708537 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Caldivirga maquilingensis IC-167 |
Kingdom | Archaea |
Replicon accession | NC_009954 |
Strand | - |
Start bp | 1979312 |
End bp | 1980016 |
Gene Length | 705 bp |
Protein Length | 234 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 641276409 |
Product | uroporphyrinogen III synthase HEM4 |
Protein accession | YP_001541708 |
Protein GI | 159042456 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG1587] Uroporphyrinogen-III synthase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.332563 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 47 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGGAGT CAATAATAGT TATTAGGGCT AAGGGTGAGG AAGGCATTAG GGGGGAGGGT GTTATTGAAG TTCCCGTGCT TAAGCCTATT CCTGATCAAA ATGCCTTAAG GAGACTGGAG GAATTATGCT CAAGGAGGTG GGATGTAGTG GTCTTCATGA GTACGGTTGC CGTTGAGTAC ACTTACAGTG TGGTCAAGGA TCCATGCTGG GTCAGGTGCA TGGCGGTTGG CCCATCCACG GCGGCGGCAG TGAGGAGGCT CTATAATAAT GAATGCTTGA TACCAAGTGA GTACTCAAGC ATGGGCTTAC TGAGAATGCT CAGGGGCTTT AATGGAAGCA TACTGGTGAT TAGGTCAATG GAGTACAGTA ATAGTCTATT TAATGAATTA GGTGGGGTAA CTGAGATTGG GTTATATAGG CTTAGTGTTA ATGAGGATGA GTTAAGTAAA CTTAAGGCGC TGATTAATGA AAGGGAGGCT GCAGGATCCC CCTATGCATT AATTATCACA AGCCCAAGGG TTGCACGTGA AGTTAGCGGT ATCTTACTTA ACTTAAGGCG AGCTCTAATT GTGGCAATAG GACCTACCAC GGCTAAGGAA TTAAGCATGC TTAATATTCC TCACAGTATT GCTAAGGTTT ACACAATAGA TGGTGCAGTT AATGAGGCTA AGCATGCATT AAGTGGAGGT GGGGATCGAA TTTAA
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Protein sequence | MQESIIVIRA KGEEGIRGEG VIEVPVLKPI PDQNALRRLE ELCSRRWDVV VFMSTVAVEY TYSVVKDPCW VRCMAVGPST AAAVRRLYNN ECLIPSEYSS MGLLRMLRGF NGSILVIRSM EYSNSLFNEL GGVTEIGLYR LSVNEDELSK LKALINEREA AGSPYALIIT SPRVAREVSG ILLNLRRALI VAIGPTTAKE LSMLNIPHSI AKVYTIDGAV NEAKHALSGG GDRI
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