Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cmaq_1896 |
Symbol | |
ID | 5709979 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Caldivirga maquilingensis IC-167 |
Kingdom | Archaea |
Replicon accession | NC_009954 |
Strand | + |
Start bp | 1972831 |
End bp | 1973574 |
Gene Length | 744 bp |
Protein Length | 247 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 641276404 |
Product | hypothetical protein |
Protein accession | YP_001541703 |
Protein GI | 159042451 |
COG category | [R] General function prediction only |
COG ID | [COG4821] Uncharacterized protein containing SIS (Sugar ISomerase) phosphosugar binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.334422 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTGGGG GCTTGGATTA CGTTAATGAG TATAAGGCTA CCGTGGTGAG GTTAATTGAC GATGTTTTAA AGGACCAGTG GAGTAACATT AAGTCAGCCG CGGACCTATG CGTCGATTCA TTAAGTAAGG GTGGGTTAAT TTACGTCTTC GGTACCGGTC ACTCAATGTT AATGGTGCTT GAGGTATTCT ATAGGTCAGG GGGATTAGCG TCAATTTACC CGATACTTGA CCCGAATCTA CTTGGGTTAA ACGGCATGTC CCTCTCAAGT AGCCTTGAGA GGCTACCCGG CTACGCAAGT AATCTCCTTA ATTCACAGAG AATAGTACCA AACTCAGTAA TGATCATAGT GTCTAATTCA GGTAAAAATG CCGCACCCGT GGAAATGGCC TACGAGGCTA AGAGGAGGGG GTTAAGGGTT ATTGCATTAA CGTCAATCAA CTACTCAAGG AGTCTTCAAC CAGATAACCC ACTTGGTAAG AGACTTTTCG AGCTGGCTGA CGTCACCATT GATAATAAGG TACCGCCAGG GGAGGCTGCA TTGGAGATTG AGGGCACTAG GGTTGCCGCA GTATCAACTA TAGTAAACGC ATTTATACTA CATAGCCTTG AATTAACGAT AATGAGTGAA TTAAGGAGGA GGGGTATTGA ACCCGAGGTC TGGGTTAGCG TTAACGTACC AGGTGGTAGG GAGCGTAATG AATCCTTATT AAGCAAGTAT AGGCAGATCG TGAGGTATTT GTAG
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Protein sequence | MSGGLDYVNE YKATVVRLID DVLKDQWSNI KSAADLCVDS LSKGGLIYVF GTGHSMLMVL EVFYRSGGLA SIYPILDPNL LGLNGMSLSS SLERLPGYAS NLLNSQRIVP NSVMIIVSNS GKNAAPVEMA YEAKRRGLRV IALTSINYSR SLQPDNPLGK RLFELADVTI DNKVPPGEAA LEIEGTRVAA VSTIVNAFIL HSLELTIMSE LRRRGIEPEV WVSVNVPGGR ERNESLLSKY RQIVRYL
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