Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cmaq_1789 |
Symbol | pgk |
ID | 5709579 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Caldivirga maquilingensis IC-167 |
Kingdom | Archaea |
Replicon accession | NC_009954 |
Strand | + |
Start bp | 1863633 |
End bp | 1864871 |
Gene Length | 1239 bp |
Protein Length | 412 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 641276300 |
Product | phosphoglycerate kinase |
Protein accession | YP_001541602 |
Protein GI | 159042350 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0126] 3-phosphoglycerate kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.0925666 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 0.515243 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGGGGGTC TAACCATACC TACTATGGAT GATATAGATA TACGATCAAA GAAGGTTCTA TTACGCATAG ACATAAATTC CCCTGTGGAT GAGAACGGCA AGATAATAGA TGATTCTAGA ATAAAGGCGC ATGTTGAGAC AATTAAGGAG TTAATTGATA AGGATAATTC CGTTGTGTTA ATGTCACACC AGGGTAGGCC TGGGGACAAG GATTTCATAA GTCTAGAGGA GCACTCCAAA TTAATTTCAA AGCATTTAAA TAGAGAAGTG ATTTTCGTGG ATGATGTAAT AGGCCCATAT GCAAGGGAAA TTATTAAAAA TCTAAAAAAC GGTGAAATTT TACTTTTAGA TAACGTGAGA TTAATCTCAG AGGAATTGAT CGAGGCCCCA CCGCAGCAGC ATGTAAAAAC CTTTTTAGTA AGGAAATTGA CCCCATTCTT CAATATTTAC ATCAATGATG CATTCGCTAC TGCGCATAGA AGTCAGCCAA GTATTGTAGG TTTTCCTCTA GTTTTACCAT CAGCTGCTGG AAGAGTGATG GAGAGGGAAG TTTCCGCCTT GGCTAGGATT TTTAATGCCG AAGATACGCC TAAAATATTT GTATTAGGCG GCGGTAAGGT TCACGATACT ATTAGGATAA TTGAGAATCT AATGAGAACA AGGATAGCAG ATAGAATACT TACTGGGGGT TTAGTTGCAG AATTGTTTTC TGTCGCTAAA GGAATGAATT TAAATACGAA GAATATGGAG ATCTTGGAAA GAATGGGTAT TTTAAGCCTA GTTCCTAGGG CTAGAAAACT ACTTCTAAGT GGAGCTCCAA TCGAAATACC AGTTGATTAT AAGGTAGAAA TAAACGGAAA CGTAATTGAG GAACCAGCTA GTAAGATCAC TGGTGTTATA AAGGATATTG GACCCGCCAC TGTGGAAATA TACTCATCAC TTATAAAAGA CGCTAAGGTA GTGGTTTTGA GGGGACCAAT GGGGGTAATA GAAGATGAGA GATTCAGGGA TGGAAGTAAG AGTGTTCTAA AAGCATCACT GGAGGGATGG GGTTACGTTA TAATAGGAGG AGGACATATG ATAAGTGCTT TAGATAAGGA TATGAAGATT GACAATAATA AGGTTCACAT CTCCACTGGA GGAGGAGCTC TTCTCTTATT CCTATCCGGG GAACGTTTAC CAGCGTTAGA GGCATTATCA ATGTCGATGA CAAACAGGGT GATGAATAAT GCCAGTTAA
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Protein sequence | MGGLTIPTMD DIDIRSKKVL LRIDINSPVD ENGKIIDDSR IKAHVETIKE LIDKDNSVVL MSHQGRPGDK DFISLEEHSK LISKHLNREV IFVDDVIGPY AREIIKNLKN GEILLLDNVR LISEELIEAP PQQHVKTFLV RKLTPFFNIY INDAFATAHR SQPSIVGFPL VLPSAAGRVM EREVSALARI FNAEDTPKIF VLGGGKVHDT IRIIENLMRT RIADRILTGG LVAELFSVAK GMNLNTKNME ILERMGILSL VPRARKLLLS GAPIEIPVDY KVEINGNVIE EPASKITGVI KDIGPATVEI YSSLIKDAKV VVLRGPMGVI EDERFRDGSK SVLKASLEGW GYVIIGGGHM ISALDKDMKI DNNKVHISTG GGALLLFLSG ERLPALEALS MSMTNRVMNN AS
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