| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cmaq_1476 |
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| Symbol | |
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| ID | 5709534 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Caldivirga maquilingensis IC-167 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009954 |
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| Strand | + |
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| Start bp | 1553448 |
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| End bp | 1554926 |
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| Gene Length | 1479 bp |
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| Protein Length | 492 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641275985 |
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| Product | polysaccharide biosynthesis protein |
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| Protein accession | YP_001541290 |
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| Protein GI | 159042038 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2244] Membrane protein involved in the export of O-antigen and teichoic acid |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.00634433 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 0.154006 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCAGGT TGCTTAATGA GCCAGCTGTA TTAGGCATAT TGACTAACTA CGCCTCAACC
ATAGTTAACT ATGCATTAGC CATAGCCTAC TTAATTGTCT TAACTAAATT CATTCCATTA
ACGCAATACG GTTACTACAA CGCCATAGTG GCATTATTAT CTATTGTGAG CCTATTCTTC
CCAACATTCG GCATAGATAA TGCAGTGGCT AGGGAGGCAG CCATGGCTCA TGCCTCAGGG
CGTGGTGTGG ATGGCTACTA CTCGGCATTA TTCGCCCTAA CATTCACCTT AACCATGGGG
TATGTGGTAG CCTCAATGGC GTTAATACCG GTTTTCATTA GGGATGGTGT ACCATCATGG
TTAATGGGCA TCATATACAT TAACGCCGTT TCAGCGTTAA TAAGCATGCT TGTTGGTGTC
ATGGGTTTTT ACCTATGGGC AACGGGTAGG GTTGTGTCCC AGGGTGTTGG TTCAACATTA
GGTAGTTTAA CTTATAGGGT TGGTGAAGTG GCCTTGGTGT TGATTCTTCG TAACGTATAT
GCCATAGCCT TATCGGTATT ACTTAATAAT ATCGTGACCT TAGCCTACTA CCTTTCTAGG
GTTAGGGTTT TACCTAGGCT TAAGTTAGGT TACAGTGTGC TTAAGGCTAG GGTTAAGGCA
TTCCTTAACT CTGGGTTTCA ATTCTGGTTA GCATACTACA TTAATTCAAT GTACGGCAGT
ATCCTAGCCT ACCTGGTTTT CAAAACCATT GGACCAACCT ACTCTGGACT ATACGGCTTA
TCCATTACCG CACTTGGTTC AGTGACCGGG TTTAGTGGGG CTGTGGGTAG TGTCTTTGGT
TCAATGGCCT CAAGGGGCTT AGCCATGGGT GTTGACTTAA ATACTATGAC TAGGGATTAC
GCCAAATCAA TGACGGTGAT TACAGCAGTA TTATCATTGG CAGCAGTTGC TCTCCTTCCC
CTTGCCCCAA TTATCCACAT CTTCAACGGT GAATACGTTA AGGCAATACC ATACCTAGCC
CTCTTAATTG GTACAGCACC AGTATCCACT ATTGATACAG TCTACATGAT GTATTACTGG
GTTAATGGTA AGGGTTGGTT AGCAGTGGAG AGGTCGCTGG TTGGGGCATT GGTAATGATT
GCAGTATTCA TGCTCCTGGT TAAGGAACTA GGCCTATACG CCGCAGTGGC CGCATCATAC
GCCGGTACAG TGGCTATTGT TGTGCTTTAC TGGCTTAATA ATAGGCCCTG GGGGCTTGGC
TTTGGCCTTG TGGCATCATT ATCCGTGCTA ATGCCCACTG TATCAGCATT ACCAATAGCC
TTATACGACC CATTACTACC CTGGCCCCTC TTCCAACTAA CCCTACTGGC ATTATTCACC
ATAATAATGC TCCTCATTAA ACCAGTAAGC ATCAGCATAA TCAATGATAC GCCAAGGATA
CTAAGACCAC TGTTAAAACC CTTCACCAGG AGGAATTAA
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| Protein sequence | MSRLLNEPAV LGILTNYAST IVNYALAIAY LIVLTKFIPL TQYGYYNAIV ALLSIVSLFF
PTFGIDNAVA REAAMAHASG RGVDGYYSAL FALTFTLTMG YVVASMALIP VFIRDGVPSW
LMGIIYINAV SALISMLVGV MGFYLWATGR VVSQGVGSTL GSLTYRVGEV ALVLILRNVY
AIALSVLLNN IVTLAYYLSR VRVLPRLKLG YSVLKARVKA FLNSGFQFWL AYYINSMYGS
ILAYLVFKTI GPTYSGLYGL SITALGSVTG FSGAVGSVFG SMASRGLAMG VDLNTMTRDY
AKSMTVITAV LSLAAVALLP LAPIIHIFNG EYVKAIPYLA LLIGTAPVST IDTVYMMYYW
VNGKGWLAVE RSLVGALVMI AVFMLLVKEL GLYAAVAASY AGTVAIVVLY WLNNRPWGLG
FGLVASLSVL MPTVSALPIA LYDPLLPWPL FQLTLLALFT IIMLLIKPVS ISIINDTPRI
LRPLLKPFTR RN
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