| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cmaq_1475 |
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| Symbol | |
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| ID | 5709533 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Caldivirga maquilingensis IC-167 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009954 |
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| Strand | - |
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| Start bp | 1552283 |
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| End bp | 1553344 |
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| Gene Length | 1062 bp |
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| Protein Length | 353 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 641275984 |
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| Product | glucose-1-phosphate thymidyltransferase |
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| Protein accession | YP_001541289 |
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| Protein GI | 159042037 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1209] dTDP-glucose pyrophosphorylase |
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| TIGRFAM ID | [TIGR01208] glucose-1-phosphate thymidylylransferase, long form |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0000811226 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 0.134994 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTTGGAC TTATTTTAGT TGCTGGTATT GGTGAACGCA TGAGGCCATT ATCATACTCA
ATACCTAAAC CCCTCATCTC CATCCTCGGT AAACCCCTTG TTGCCTACAC CATGGATAAG
TTAAAGGATA TTGATGTTAG TAGGATTGGG CTTGTTGTGG GTAGGTTTAG TGAATTATTC
ATGGACTACT TCAACAATGA CCCAAGACTC AACATCCCAG TAACCTACAT ACGCCAGGAG
AGGCGCCTCG GCATTGCCCA CGCCATCTAC AGGGGTATTG AGGAGGGTTT CCTAAGGGAG
GACTTCGTGG TTGCTCTGGG TGACAACTAC TTCTCGGAAT CATTCACGCG ATTCGCCAGG
GAGTTTCTTG AGGGTGGTTA CGACGTCTTC ATAGTCCTCA CTAGGCATCA GCAGTTTCAA
CGCTTTGGTA ATGCCGTGGT GGAGGGTGGT AGGGTGGTTA GGCTTATTGA GAAGCCTAAT
CAACCCATAC CTAACTCCTA CGTGGTCACT GGACTCTACT TCTTCCGTGA CCCTGATGCA
GTGGCTAAGG CGTTCTCCAA CCTGAGGCCC TCGGCCCGTG GTGAGTATGA GGTGACTGAT
TTAATACAAT GGTTCATAGA TAATAATTAC AGGGTTGGTT ACTCATTAAC CACTGGTTGG
TGGAAGGACA TGGGTACACC GGAGGATTTA ATAGATTTAG TGCAGTTGAT GCTTGATGAC
GCTAAACCGC GGATTGATGG TGACGTGAGG GGTAGGGTAA GTAGTAGGGT TATTGTGGAG
AAGGGTGCTG TCGTGGAAGG CGCAGTCCAT GGACCAGCCT ACGTGGGTAG GGGTGTCTAC
GTGGGTAAGG ATGCTGAGAT TGAGCACTTC GTGAGCCTTG AGGAGGGTGT ACACATGGAG
AGCGGCAGCA TATCAAGGAG CCTAATCCTC GAGGGCGTTA CACTACACCT GGGTAAGGCT
AGGTTAACGG ACTCGGTAAT AGGCCCTAGA TCATATGTAA TACTTAAAAA CGGTAGACAC
AGGATGATTA TTGGTGAAAA TGGTAGGGTT GAGGAGGTGT GA
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| Protein sequence | MLGLILVAGI GERMRPLSYS IPKPLISILG KPLVAYTMDK LKDIDVSRIG LVVGRFSELF
MDYFNNDPRL NIPVTYIRQE RRLGIAHAIY RGIEEGFLRE DFVVALGDNY FSESFTRFAR
EFLEGGYDVF IVLTRHQQFQ RFGNAVVEGG RVVRLIEKPN QPIPNSYVVT GLYFFRDPDA
VAKAFSNLRP SARGEYEVTD LIQWFIDNNY RVGYSLTTGW WKDMGTPEDL IDLVQLMLDD
AKPRIDGDVR GRVSSRVIVE KGAVVEGAVH GPAYVGRGVY VGKDAEIEHF VSLEEGVHME
SGSISRSLIL EGVTLHLGKA RLTDSVIGPR SYVILKNGRH RMIIGENGRV EEV
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