| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cmaq_1446 |
|---|
| Symbol | |
|---|
| ID | 5708697 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Caldivirga maquilingensis IC-167 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009954 |
|---|
| Strand | + |
|---|
| Start bp | 1523629 |
|---|
| End bp | 1524564 |
|---|
| Gene Length | 936 bp |
|---|
| Protein Length | 311 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 641275956 |
|---|
| Product | NAD-dependent epimerase/dehydratase |
|---|
| Protein accession | YP_001541261 |
|---|
| Protein GI | 159042009 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1087] UDP-glucose 4-epimerase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.000127468 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGCCC TAATAACAGG AGGGGCAGGA TTCATAGGAA GCCACCTAGT AGATAAACTA
CTAGCAAGGG GCTACCAAGT CAAGGTAATA GACAACCTAA GCACGGGAAG AATAGAAAAC
ATAACCCACG TACTAAACAA AATACAATTC ACCAAAACAG ACCTAAAAAA CATAGAAGAC
ACACTAAAAG CACTCAAAGA CACAGACGTA ATATTCCACT TCGCGGCAAA CCCGGAGGTC
AGGGTCAGCA CAGTCAGCCC TGAGGTGCAC TTCAACGAGA ACGTGGTCGC CACGTTCAAC
CTGCTCGAGG CAATGAGGAG GATGGACGTG AGGGAGATTG TGTTCGCGTC GTCTAGCTCG
GTCTACGGGG AGCCTGAGGA AATACCGGTA AGCGAGGACG CGCCAACAAG GCCCGTCTCG
GTCTACGGAG CGAGTAAGGC GGCCTGCGAA AATCTGATAC ACGCGTACTC AAGGCTCTAC
GGGATGAAGG CGGTGATCCT GAGGTACGCG AACGTGGTTG GGCTGAGGCT GAGGCACGGT
GTAATATACG ACTTAATCAT GAAATTAAGG AAGGACCCAA CCAGGCTGGA GGTGCTCGGC
GATGGGACCC AGGTCAGGAG CTACATACAC GTGGATGACG CCGTGGAGGC AACGTTAATA
GCCCACGAGA GGACTGGAGG CGGCTACCAC GTATTCAACG TGGCGAGCGA GGACTGGATA
ACCGTGGACG AAGTCGTAAA CATAATCACG GAGGAACTCG GGGCAAAGCC AGAGATAATC
CACAAACCAA TCCTACATGG CGTTGGCTGG CCAGGGGACG TGAAGAGGAT AGCCCTGAGG
ATAGACAGGC TCAGGGAGCT GGGCTTCAAG CCGAGAATGA ATAGTAAAGA AGCCGTGAGG
GTTACCGTAA AGGCACTAAT CAGGGAATCA GGATAA
|
|---|
| Protein sequence | MKALITGGAG FIGSHLVDKL LARGYQVKVI DNLSTGRIEN ITHVLNKIQF TKTDLKNIED
TLKALKDTDV IFHFAANPEV RVSTVSPEVH FNENVVATFN LLEAMRRMDV REIVFASSSS
VYGEPEEIPV SEDAPTRPVS VYGASKAACE NLIHAYSRLY GMKAVILRYA NVVGLRLRHG
VIYDLIMKLR KDPTRLEVLG DGTQVRSYIH VDDAVEATLI AHERTGGGYH VFNVASEDWI
TVDEVVNIIT EELGAKPEII HKPILHGVGW PGDVKRIALR IDRLRELGFK PRMNSKEAVR
VTVKALIRES G
|
|---|
| |