Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cmaq_1433 |
Symbol | |
ID | 5708959 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Caldivirga maquilingensis IC-167 |
Kingdom | Archaea |
Replicon accession | NC_009954 |
Strand | + |
Start bp | 1513623 |
End bp | 1514645 |
Gene Length | 1023 bp |
Protein Length | 340 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 641275943 |
Product | hypothetical protein |
Protein accession | YP_001541248 |
Protein GI | 159041996 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.00000014785 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.00000326211 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGAGGCGCA TTAAGCTAAG ATTCTCAGGG CAGGAGATTG AATTCACAGA CCGTGAAGTA GCCATTAGGC AGATTGAGAA ATTGGCTGAG AAGGGTACGT GGAACCCAGT AGTCATATAC GGGCCTGAGG GTTGCGGTAA GTCCGCGTTC TTAAAGCAAG CTGTTGAGGT TCTTGGGGAG TATGATTACT CTGTTGTTAA GGTAAGTCCA CTTGAGGATG AGTCCAATGA GAAGTTAAGG TACTCTGAGG AGTTGAGGGG ATTGTTCAGG GACATAATGA CCCGCATACC CACCCCCTTC AATGATGCGT CAGCCTTAAT TGACATAGCT ATCTCACTAC TCTACGATGT GGTGAGGAGG AGGATTAGGC GAAAAATAGC CCTACTAGCC GATGACGTAT TCCAGGCCAT TGGCCTAGAC AAGGCAGAAC TACTAGTTAA AAGACTCCTA AACATGATAG AGTACTCATC GGTTGATTAT GAAAGGATTG TGGTGATAGT GGCCACAAGT GAGGGGGTGA CTTGGGGGCG TATTGGGCGT CATAGGTGGG CTGAGATAAT GGCAATGTGG AACATGCCCA GGGAGGGGTT TGGGAAGCTT TACAACGCAT TGCCTGGGCC GAAACCACCA TTTGAGGAAG TATGGAGGTG GACGGGCGGG AACCCTAAGG CATTGGAAAT GCTGTATAAG AAGGGATGGG ATATAAATAA TGTGGTGAAT GAAGTAATCT TTCAACGTAA AGTAACGGAG CTAGTAAGTC AGCTGAACGA GACGGAAAAG GAGATACTGG AGCAGGCATT GGAGGATCCA GACGTATTAC TGAGAAGAAT CCGCGATGGA GAAAAACTAC TGAACACGCT AATAGACATG AACCTCGTAT TGAGAGTGCC TGAATTCAGG ACTGAGTACT TATGGGTCGA CCAACCACCA CCTGAGAGGG ATCTTGGACT CGGCATTGGC AGGTACTACA CGTGGCAGAC GCCGCTGCAC AGGGAGGCTG TGAGGAGAGC CTTGGAAAAC TGA
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Protein sequence | MRRIKLRFSG QEIEFTDREV AIRQIEKLAE KGTWNPVVIY GPEGCGKSAF LKQAVEVLGE YDYSVVKVSP LEDESNEKLR YSEELRGLFR DIMTRIPTPF NDASALIDIA ISLLYDVVRR RIRRKIALLA DDVFQAIGLD KAELLVKRLL NMIEYSSVDY ERIVVIVATS EGVTWGRIGR HRWAEIMAMW NMPREGFGKL YNALPGPKPP FEEVWRWTGG NPKALEMLYK KGWDINNVVN EVIFQRKVTE LVSQLNETEK EILEQALEDP DVLLRRIRDG EKLLNTLIDM NLVLRVPEFR TEYLWVDQPP PERDLGLGIG RYYTWQTPLH REAVRRALEN
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