Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cmaq_1394 |
Symbol | |
ID | 5709452 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Caldivirga maquilingensis IC-167 |
Kingdom | Archaea |
Replicon accession | NC_009954 |
Strand | - |
Start bp | 1472612 |
End bp | 1473337 |
Gene Length | 726 bp |
Protein Length | 241 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 641275905 |
Product | Asp/Glu racemase |
Protein accession | YP_001541210 |
Protein GI | 159041958 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG3473] Maleate cis-trans isomerase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 46 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTGGATTA AACTGGGCAC TATTATTCCA TCATCAAATA CCACAGTAGA GAGGGAATTC ACGAGAACTA TACTTGAGCC TGATGTTACA GTGCATACAT CACGAATAAC ATTGAAGGAA GTCACGTTAA ATGGCCTTAA GGAAATGGAG AGGGAAACAG AGCGTGCAGC TCAGGAATTA GGCACTGCGA AGGTAAATAT AATAGCCTAT GCATGCACCA CAGGGAGTTT ATTCAAAGGC CCCAATCATC ATCTAGAGAT TAAGCGTAGA ATTGAAGATA TAACTGAAAT ACCAGCCGTA GCCACATCTG GCGCCGTAAT AGATGCCCTT TCTTATTTTA ATGCACGTAA AGTATTGGTG GTTACGCCAT ATATTGATGA ATTGAATGTT AAGGAAAGGG AGTTTCTTGA AGCCCATGGC ATCCAAGTAG TGAGTATAAA GGGACTCGGT ATCTCCGATA ATACAGTGAT TGGATCCCTG GACCCCAGCA TTACCTATGA GACTGCATTA AATGAGGCAC GGAGATTTGG CTCTGATTAT GACGCATTAT TTATTTCCTG CACTAATTGG CGTAGCTTCG AAGTAATAGG TGATCTTGAA AGGCAATTAG GTAAACCAGT GATTAGTAGT AATAGCGCCA CACTATGGGC TGTAATAAGA AACCTAGGTA TCAAGGTTAA ATTAAGGTAT AATTTAGGAG CATTATTTAG TGACTTAACA TTATGA
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Protein sequence | MWIKLGTIIP SSNTTVEREF TRTILEPDVT VHTSRITLKE VTLNGLKEME RETERAAQEL GTAKVNIIAY ACTTGSLFKG PNHHLEIKRR IEDITEIPAV ATSGAVIDAL SYFNARKVLV VTPYIDELNV KEREFLEAHG IQVVSIKGLG ISDNTVIGSL DPSITYETAL NEARRFGSDY DALFISCTNW RSFEVIGDLE RQLGKPVISS NSATLWAVIR NLGIKVKLRY NLGALFSDLT L
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