Gene Cmaq_1393 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCmaq_1393 
Symbol 
ID5709427 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaldivirga maquilingensis IC-167 
KingdomArchaea 
Replicon accessionNC_009954 
Strand
Start bp1471905 
End bp1472606 
Gene Length702 bp 
Protein Length233 aa 
Translation table11 
GC content35% 
IMG OID641275904 
Productbeta-lactamase domain-containing protein 
Protein accessionYP_001541209 
Protein GI159041957 
COG category[R] General function prediction only 
COG ID[COG0491] Zn-dependent hydrolases, including glyoxylases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATAAGT GGGAAGTACT ATCACCAGGA GTACCGTTAT ATACTAACAT GGGTTTCGTG 
GGGTACTGCA CATCACTACT CGTAGAGGCG GATGGGTATC ATGTAGTAAT TGATCCAGGG
CATTATGGAA ATAGGGAGTA TATGTTAAAG GCATTGAGTA GTAGGGGAAT TAAGCCCAGT
GATGTTGAGC ACATAATACT CACACACGTG CACTATGATC ACGCACTTAA CATAACTCTA
TTCCCCAACG CTAAAATATA CATATCAAAG AATGAGTATG AATACTCAAT GAGTAGTAAT
GACCCATATG AAGTCCCCTT CTTACTACAA TTAATGAGAA ATAGACTGGT ATTTATAAAG
GAGGATGATG AATTATATGG AATTAAATTT GTGGAATTAC CAGGGCATAC GGCGGGTAGT
ATAGGGGTAG TGATTAATAA TGATACTTTA GTTGCTGGGG ATGCAATTAA GTATATTACA
GAGGCTATTA AAAAATCCAC AACATTTGCA TACTATGACA TTAATAAGGC TAATGCAAGC
ATAGTCAAGG CTATAAATAT GGCTCACATA ATAATCCCTG GTCATGATGC GCCATTTATG
ATTAAGGGAA ATGAAACCAT AGAGCCATTA AGCAATAAAT CAAATAACTT CATAATATAT
TTGAGGAGTA AAGTAAATTT ATCAATAAGT ATTGATTTTT AA
 
Protein sequence
MHKWEVLSPG VPLYTNMGFV GYCTSLLVEA DGYHVVIDPG HYGNREYMLK ALSSRGIKPS 
DVEHIILTHV HYDHALNITL FPNAKIYISK NEYEYSMSSN DPYEVPFLLQ LMRNRLVFIK
EDDELYGIKF VELPGHTAGS IGVVINNDTL VAGDAIKYIT EAIKKSTTFA YYDINKANAS
IVKAINMAHI IIPGHDAPFM IKGNETIEPL SNKSNNFIIY LRSKVNLSIS IDF