| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cmaq_1327 |
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| Symbol | |
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| ID | 5710071 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Caldivirga maquilingensis IC-167 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009954 |
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| Strand | - |
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| Start bp | 1401263 |
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| End bp | 1402231 |
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| Gene Length | 969 bp |
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| Protein Length | 322 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 641275834 |
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| Product | oligopeptide/dipeptide ABC transporter, ATPase subunit |
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| Protein accession | YP_001541143 |
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| Protein GI | 159041891 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0444] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component |
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| TIGRFAM ID | [TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0010224 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 0.375909 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGGCTCTAT TGGAGGTTAA GGATCTTAGC GTCACATATA GGACACCTTT CGGTACTGTT
AAGGCTCTTG ATGACGTATC CTTTACACTG AATGAGGGCG AGGCCATTGC TGTTGTTGGT
GAGAGCGGTT CAGGTAAATC AACACTTGCA TTAGCCATAA GTAGATTACT GCCGCCTAAT
GCTAGGTTTA GGGGTAGTAT TATTTTTGAG GGCGTGGATT TAGCTAGGTT AAGTCCAAGT
GAATTAAGGG TAATTAGGGG TACTGGTATA TTCATGGTGT TTCAGGAGCC GGCTAATAGT
CTTAACCCAG TTTATAGAAT TAAGGATCAG TTAATGGAGG CTGTTAGGAT TAGGAGACTT
AGGAGTAATG AGCCCTTTGA TGAGGGCGAG GCCTTGAAGG AGATAATAAG TACGCTTAGG
GATGTGAGGA TGCCTGACCC TGAGATCATT ATAGAGAGGT ACCCTCATCA ATTGAGTGGT
GGACAGATTC AGAGGATTAT GATAGCCATG GGCCTCCTCA TGAGGCCTAA ACTATATATT
GCTGATGAAC CAACCTCAGC CCTCGACGTG ACTGTTCAGG CCCAAATACT TAAACTGCTT
AAGGATCTTA AGAATGAATA TAATTTATCA ATAATATTCA TAACCCATGA CTTAGCGGTG
GCGTCAATAA TTGGGGATAA GGTAATGGTA ATGTACGCTG GTCAAATAGT TGAGGAGGGT
TTAATGAGTG ATGTAATCAC TAAACCCTAC CACCCATACA CGCAGGGGTT ATTGAGTAGT
TTACCGAGGA TAAGTAAGTA TGAGGGTAAG TTACCTATAA TAAGCGGTGC GGTACCAAGC
CTAATTAACC CACCCTCAGG CTGTAGATTC CACCCAAGGT GCCCATACGC CACTGACACG
TGTATTAAGG TAATGCCTCA ACTTAAGAAT GTTGAGAATA GGAGGGTGAG GTGCCACCTC
TATGCCTGA
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| Protein sequence | MALLEVKDLS VTYRTPFGTV KALDDVSFTL NEGEAIAVVG ESGSGKSTLA LAISRLLPPN
ARFRGSIIFE GVDLARLSPS ELRVIRGTGI FMVFQEPANS LNPVYRIKDQ LMEAVRIRRL
RSNEPFDEGE ALKEIISTLR DVRMPDPEII IERYPHQLSG GQIQRIMIAM GLLMRPKLYI
ADEPTSALDV TVQAQILKLL KDLKNEYNLS IIFITHDLAV ASIIGDKVMV MYAGQIVEEG
LMSDVITKPY HPYTQGLLSS LPRISKYEGK LPIISGAVPS LINPPSGCRF HPRCPYATDT
CIKVMPQLKN VENRRVRCHL YA
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