Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cmaq_1302 |
Symbol | |
ID | 5708909 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Caldivirga maquilingensis IC-167 |
Kingdom | Archaea |
Replicon accession | NC_009954 |
Strand | + |
Start bp | 1374968 |
End bp | 1375738 |
Gene Length | 771 bp |
Protein Length | 256 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 641275809 |
Product | hypothetical protein |
Protein accession | YP_001541119 |
Protein GI | 159041867 |
COG category | [S] Function unknown |
COG ID | [COG4879] Uncharacterized protein conserved in archaea |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.00000684372 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 0.255642 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTTGAGG TTAAGGACCT GTATAAAGAG AGGGTTAACG TTGCTGTAGA GCTTTGGGAT AAGGTGCTTA GGGGGGAGGT GGTATCAAGG GGTGAGTTAA TTAACCTACT AACTAAGTAC TATGATGAAC ACGATATTGA GCCGTTTAGG GGATTAAGTA AGATTGATAT TTACGATAAG GAGTTAGCCA CAGTGTATGT TGTTGGGGTT TATGGAATGG GGCTTGTGAC TCAACGTGAG GTTAAGGATA ACTACGGTTC AATATTTAAA GTGGAGTTAA TTTCAGATGA GGCCTACGGT ATAATTAAGA ATTACAATGG TGAGGAGTCT AAATTAGCCT TAAGGAACCT AATAGAGGAT AATCAAGCCC TCGGTGACTC ACTGGAGGAG AAGGTTTTCA GGGTGTATAG GCTGGTGTAC ACTGGGGCTG TCCTAGGCTT CATGCCTGAG GACGATATTT CAAGAACCTA CAGGGTTCTC TACGAGGTAT TTGAACCACT TAGGCAGAGG CTTGTTAACT ATGTTAAATT CTACATAGCC ACTAAGATAG CTGAGGGCAT TGCCATAGGC CGCTTCAGCA ACCAGAATGA GGTTAGGATT GAGAAGTACG CCTACTGCAT AAGGCTAGGC TTAGAGAAGT GTGCGCCGAA TAATAGGCTC ATTCATGAGA TAGCCCTATC AGTATACAAG GTACCACCCA ATGTTGTTAA TAGGCTTGTA CCATTGGTTA AGAGATCATC CAAGTCCTCC CTTATCCCTA AGGCTTATTA A
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Protein sequence | MVEVKDLYKE RVNVAVELWD KVLRGEVVSR GELINLLTKY YDEHDIEPFR GLSKIDIYDK ELATVYVVGV YGMGLVTQRE VKDNYGSIFK VELISDEAYG IIKNYNGEES KLALRNLIED NQALGDSLEE KVFRVYRLVY TGAVLGFMPE DDISRTYRVL YEVFEPLRQR LVNYVKFYIA TKIAEGIAIG RFSNQNEVRI EKYAYCIRLG LEKCAPNNRL IHEIALSVYK VPPNVVNRLV PLVKRSSKSS LIPKAY
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