Gene Cmaq_1108 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCmaq_1108 
Symbol 
ID5709911 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaldivirga maquilingensis IC-167 
KingdomArchaea 
Replicon accessionNC_009954 
Strand
Start bp1167198 
End bp1168055 
Gene Length858 bp 
Protein Length285 aa 
Translation table11 
GC content46% 
IMG OID641275608 
ProductNAD+ synthetase 
Protein accessionYP_001540926 
Protein GI159041674 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0171] NAD synthase 
TIGRFAM ID[TIGR00552] NAD+ synthetase 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.888538 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones49 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGCCTT GGATTACCCT TGATAGGATA CTGAACGTTA ATTACGATTA CATTGAAAGA 
AGGATAGTGG ACTTCATAAG AACATACGTA AACAGCGTGG GCGCTAAGGG TGCTGTTATA
GGGCTTAGTG GTGGTATTGA CTCAAGTGTA ACCGCATCAC TGCTGGTTAG GGCTTTAGGT
AAGGATAAGG TCCTAGCCTT AATAATGCCA TACAAGACAA CGCCGCCTGA GGATGTTAAG
GACGCTATTC AACTAGCCCA GATGCTGGGT GTAAAGTATG ATGTTGTTAA CATAGACCCC
ATTAGGGCAT CATTCTCAAG CACAATACCT GCCTTCAAGG AAAGTGAAAT TGTTGCTAAC
GGCAACATAC TGGCTAGAAT AAGGATGACG ATACTGTACT ACTACGCCAA CCTAAACAAC
ATGATTGTCG CCGGTACCGG GGATAAGAGT GAGTTATTGA TAGGCTACTT CACTAAGTAT
GGTGATGGCG GTGTTGATAT ATTGCCAATA GGGGATGTGT ATAAGAGTCA AGTTAGAATG
CTTGGGAGGC GTTTAGGCTT ACCTGACTCA ATAGTCACGA AACCCTCAAG CCCACGCCTA
TGGGAAGGTC AGACCGCTGA GGGTGAATTG GGTGTTAGTT ACGCTGATAT TGATGTTATC
CTCCATGCGT TAGTTGACTT AAGGATGAAT CCACAGAAGG CTCAGGAGGC CACTGGGAAG
CCTCTTAACC TTATTGAACA GGTATGGAGG AGAGTGGTTA CAACTGAGCA TAAGCGTAGA
ACCCCAGTGG TGCCTAGGAT TGGGTTAAGG ACTATTGGGC TTGACTGGCG TATGCCGGTT
CACTACAATG GCTACTAA
 
Protein sequence
MQPWITLDRI LNVNYDYIER RIVDFIRTYV NSVGAKGAVI GLSGGIDSSV TASLLVRALG 
KDKVLALIMP YKTTPPEDVK DAIQLAQMLG VKYDVVNIDP IRASFSSTIP AFKESEIVAN
GNILARIRMT ILYYYANLNN MIVAGTGDKS ELLIGYFTKY GDGGVDILPI GDVYKSQVRM
LGRRLGLPDS IVTKPSSPRL WEGQTAEGEL GVSYADIDVI LHALVDLRMN PQKAQEATGK
PLNLIEQVWR RVVTTEHKRR TPVVPRIGLR TIGLDWRMPV HYNGY