| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cmaq_1091 |
|---|
| Symbol | |
|---|
| ID | 5710060 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Caldivirga maquilingensis IC-167 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009954 |
|---|
| Strand | + |
|---|
| Start bp | 1145645 |
|---|
| End bp | 1148257 |
|---|
| Gene Length | 2613 bp |
|---|
| Protein Length | 870 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 641275590 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_001540909 |
|---|
| Protein GI | 159041657 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 55 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATTGTA CCTTTAAGGT GATTTCCGAC TTAGATAAAG ATCTCAGGTT CAGGAATAGT
GAAGTATGCT TAACAAATGA TAATAGAATA ATAGTGAGTA GTGATGGTAA GGAGGAGTCT
TATCAATTAA GTGATGTGCA GAGGGTTTAT GTTGAGGATG GTATAGGTAT AGGTAAGCTT
ATCCTAGTTA TGAAGAATGG TGAGGAGGTT GAGGCTGCTT ACTTCACGAA GAAGCCTATT
GAGGAGTTTA GGAGGTTTGC AATATTTGTT AATGGGCGTA TAAACGGTAA TGGGCATTAT
GAGGGTGTTA CGTTAAGTAG GGAGAATAGG AAGCCTAACG TTAGGAGTAC GTTGCTTTGG
TTACTTAACT TCATGAGGCC TTACTGGCAT AAGATGCTTA TAGGGATTAT ATTATCTATA
AGCATAGCAA TGCTTAACCT GGTTCCACCC TACTTACTTA AAATACTGAT TGATAGCGTC
TTCTTAACCA AGACCCACTC AATGAAGCTC TTCGTTAATT TAACACTAAC ACTAATAGGG
TCATATATTG GGGTTACGGC ATTATCCATA GCCCAGAACT ACATACTCAA CACCGTTGGG
CAGAGGGTTG TGAACGATAT AAGATCCAAG GTTTTTGAGC ATGTTATGAG GCTTTCAGCA
TCATTCATAG ATAGGATGTC AACGGGTAGA ATACTCTCAA GGCTAACTAA TGATGCAGGC
AACACTCAGT GGCTAATGGT CTGGGGCTTA CCAACACTCA TAGTTAATAT ACTAACTCTA
ATAGGTATAG GTGTAATATT ATTTACCATG GATGTTAAAC TAGCCCTATT CGTACTACTG
CCGACTCCAA TAATAGCTTA CATGATATAT AGGTACCGTA AGAGGTCGCA TAGGGTCTAC
CACAGGAATT GGAGGAGGAG TGCTGATGTA ACCAGTGCTC TATCAGACAC TATACCTAAT
TATATGGTTA TAAAGTCCTT CGCCAAGGAG GATTATGAAT CAAATAGGTT AAATGACTTA
CTCAATAGGC TTTATGAGTC CCAGGTTAAG GTAACTAAAA TGAATGTTAG TTACTGGCCA
TTCCTAGGCC TACTTACATC ATTATCAACA GTCATGATGT GGTGGTTTGG TGGTGAGCAG
GTTATTGCAG GTACTATTCA ATTAGGTACC TTGACCGCGT TCGTATCCTA CATGGCCCAG
TTCTACGGAC CTATAAACAA CCTAAGCAAC ATAATACCGT TCATCCAGCA GGCTGTGACC
TCGGGGGATA GGCTTAGGGA GATAATGGAG GCTGAGCCTG ATGTTAAGGA ACCTGAGAAG
CCTAAGAGAC CTGACTTGAA GGGTGATATA CTGTTCAGTA ATGTTTGGTT CAGTTACGAT
AAGTACACGC CTGTCTTAAA GAACATAAAC CTGAGGATAA GGGTTGGTGA GAAGGTTGCA
GTGGTTGGTA AGAGTGGTTC AGGGAAGAGT ACGTTATCTA AGCTACTGCT TAGGATGTAT
GATGTTGACT CAGGGGAGAT AAGGATAAAT GGGGTTAATG TGAAGGAGAT CGACCTACAG
TACCTTAGGG ATAGGATAGC GTATGTGCCG CAGGAGGTGG CTTTATTCGA TAGCACTGTG
GCTTACAATG TGGCTTACGG TAGTGGGAGG CATGTTGAGC CTTGGGAGAT CATAGCGGCT
TGTAAGGCGG CTAGGATTCA TGACGAGATT ATGCAGTTGC CTTTAGCCTA CGACACTAAC
CTGGGTGAGA GGGGTTCATC ATTATCCGGC GGCCAGAGGC AGAGGATTTC AATTGCTAGG
GCTATTATTA AGCAGCCGGA TATCGTAATA CTTGATGAAG CAACGTCAAA CCTTGACGTT
ATTAATGAGG CTGAGGTCTA CAGAGCCATC ATGAACCTGG CTAAGGGTAG GACTGCAATA
TTCGTTACTC ATAGTTTCGT TGAGGTCATG AGTGCGGATA GGGTTATAGT TATGGCAAAT
GGGGAAATTG TAGAGGAGGG TAAGCCAAGT GAATTATTGG CTAAGAGGGG GCACTTCTAC
AATATGTTTA AGGATCAGCT TGAATTATTC ACCGGTGAAT TGAAGCTTCT TGAGAATGAT
GACGGTAATG GGAATGCCTT AACCCTTAGG GATTACGTTA AGGACGTAAT GGTTGAGCCA
GGTAAAGTTA AGGTTAAGCC AGGGAGTAGG AGGAGTCTAG TTACATTGAT CGTTAATGGT
GAGGTTTACA AGGATCTTAA ACCAAAGTTA CCGTTCCCAA TATCCCAGCC TGAGTACGTC
ATATTCTATG ATAAGGATGG TAAGGAACGC TTCATTCTGA GTAATTATAA GGCACTCGAC
GCTGAATCAG TTAAGCTACT TGAGACCGCA ATAGCCTTGA ATAACTTCAA GCCCGTAACG
TTGAGTGTTA AGAGGATTGA TGTTAAGGGT GATGAATTGG AGTGGCATCT AGTGACTAAC
TACGGTGAGG TTGTGGTTAA TACTAGGGGC AGGAGGAACG TGATGATCAT GGATAGTAAG
TTAACTTTAG TTGATATTCA TGATAATATA TATGAGATTG ACTTAAAGAG ACTTGATAAG
GATAGCCTTA AGCTAATAGC AGACACAGTG TGA
|
|---|
| Protein sequence | MDCTFKVISD LDKDLRFRNS EVCLTNDNRI IVSSDGKEES YQLSDVQRVY VEDGIGIGKL
ILVMKNGEEV EAAYFTKKPI EEFRRFAIFV NGRINGNGHY EGVTLSRENR KPNVRSTLLW
LLNFMRPYWH KMLIGIILSI SIAMLNLVPP YLLKILIDSV FLTKTHSMKL FVNLTLTLIG
SYIGVTALSI AQNYILNTVG QRVVNDIRSK VFEHVMRLSA SFIDRMSTGR ILSRLTNDAG
NTQWLMVWGL PTLIVNILTL IGIGVILFTM DVKLALFVLL PTPIIAYMIY RYRKRSHRVY
HRNWRRSADV TSALSDTIPN YMVIKSFAKE DYESNRLNDL LNRLYESQVK VTKMNVSYWP
FLGLLTSLST VMMWWFGGEQ VIAGTIQLGT LTAFVSYMAQ FYGPINNLSN IIPFIQQAVT
SGDRLREIME AEPDVKEPEK PKRPDLKGDI LFSNVWFSYD KYTPVLKNIN LRIRVGEKVA
VVGKSGSGKS TLSKLLLRMY DVDSGEIRIN GVNVKEIDLQ YLRDRIAYVP QEVALFDSTV
AYNVAYGSGR HVEPWEIIAA CKAARIHDEI MQLPLAYDTN LGERGSSLSG GQRQRISIAR
AIIKQPDIVI LDEATSNLDV INEAEVYRAI MNLAKGRTAI FVTHSFVEVM SADRVIVMAN
GEIVEEGKPS ELLAKRGHFY NMFKDQLELF TGELKLLEND DGNGNALTLR DYVKDVMVEP
GKVKVKPGSR RSLVTLIVNG EVYKDLKPKL PFPISQPEYV IFYDKDGKER FILSNYKALD
AESVKLLETA IALNNFKPVT LSVKRIDVKG DELEWHLVTN YGEVVVNTRG RRNVMIMDSK
LTLVDIHDNI YEIDLKRLDK DSLKLIADTV
|
|---|
| |